RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NDST4Q9H3R1 872 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 SUV39H2Q9H5I1 410 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NLRC4Q9NPP4 1024 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 OCIAD1Q9NX40 245 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 TAB2Q9NYJ8 693 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 UBA2Q9UBT2 640 aaPredicted RBP11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 NOCTQ9UK39 431 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 APPL1Q9UKG1 709 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ACSL6Q9UKU0 697 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 ST14Q9Y5Y6 855 aa11.73□□□□□ -0.53
NSMCE1-202ENST00000561960 PRSS38A1L453 326 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 GTPBP10A4D1E9 387 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 STMND1H3BQB6 276 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 TMX2-CTNND1H3BSU7 103 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 CACNB4O00305 520 aaPredicted RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 EPHB6O15197 1021 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 FGF1P05230 155 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 ELFN1P0C7U0 828 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 TNFAIP3P21580 790 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 SCNN1AP37088 669 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 PEX5P50542 639 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 BPIFB4P59827 614 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 FMO1Q01740 532 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 BIRC2Q13490 618 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 MTM1Q13496 603 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 UBAP2LQ14157 1087 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 BORAQ6PGQ7 559 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 PIM3Q86V86 326 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 ZSCAN30Q86W11 494 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 DNAAF5Q86Y56 855 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 TP53INP2Q8IXH6 220 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 RTL3Q8N8U3 475 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 ZNF564Q8TBZ8 553 aaPredicted RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 ZDHHC1Q8WTX9 485 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 PDCD6IPQ8WUM4 868 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 PCDHB18PQ96TA0 734 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 TUBGCP2Q9BSJ2 902 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 SEPT11Q9NVA2 429 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 GEMIN8Q9NWZ8 242 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 DKK3Q9UBP4 350 aa11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 MRPS18BQ9Y676 258 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-202ENST00000561960 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 A0A1W2PQC6 194 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 EFCAB7A8K855 629 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 DFFAO00273 331 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 LSM8O95777 96 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 UCHL3P15374 230 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 GPD1P21695 349 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 CD1CP29017 333 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 UGT1A3P35503 534 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 CA9Q16790 459 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 ANKS6Q68DC2 871 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 C16orf46Q6P387 395 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 WDR59Q6PJI9 974 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 RFLNAQ6ZTI6 216 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 MARK2Q7KZI7 788 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 HEATR4Q86WZ0 1026 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 CACNA2D3Q8IZS8 1091 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 MCEEQ96PE7 176 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 SELENOOQ9BVL4 669 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 WDR26Q9H7D7 661 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 SAMSN1Q9NSI8 373 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 TAAR2Q9P1P5 351 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 KLHL3Q9UH77 587 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 CD84Q9UIB8 345 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 MFHAS1Q9Y4C4 1052 aa11.71□□□□□ -0.53
NSMCE1-202ENST00000561960 TSPAN11A1L157 253 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 BLACEA4D250 179 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 K7EM74 188 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 PPM1DO15297 605 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 CPNE6O95741 557 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 KRT3P12035 628 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 MMP8P22894 467 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 MAPK9P45984 424 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 ATP1A2P50993 1020 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 KIAA1024LP59773 190 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 RPL7AP62424 266 aaKnown RBP11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 NRG1Q02297 640 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 PTP4A2Q12974 167 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 DPCR1Q3MIW9 517 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 SRLQ86TD4 932 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 PDFQ9HBH1 243 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 APMAPQ9HDC9 416 aa11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-202ENST00000561960 SLC39A1Q9NY26 324 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms