RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 APBB3O95704 486 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 IGLV2-14P01704 120 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 MT-ND3P03897 115 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ENO1P06733 434 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ALDOCP09972 364 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 TNNT1P13805 278 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CHN1P15882 459 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 STIP1P31948 543 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 SLC37A1P57057 533 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 EVCP57679 992 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 FOXL2P58012 376 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 FKBP1AP62942 108 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 SHC2P98077 582 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CDK18Q07002 472 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CDC16Q13042 620 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 MRPL28Q13084 256 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ZNF362Q5T0B9 420 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 KIAA1324Q6UXG2 1013 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 MFSD6Q6ZSS7 791 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 GALNTL5Q7Z4T8 443 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ANKS1BQ7Z6G8 1248 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ASB12Q8WXK4 309 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 KAT2BQ92831 832 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 FRAT1Q92837 279 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ATP2A3Q93084 1043 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 REPS1Q96D71 796 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 KTI12Q96EK9 354 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CDCA5Q96FF9 252 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CNDP2Q96KP4 475 aaKnown RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 SPATA17Q96L03 361 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 DESI2Q9BSY9 194 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ABHD16BQ9H3Z7 469 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 SEMA4GQ9NTN9 838 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 IRAK4Q9NWZ3 460 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ARPP21Q9UBL0 812 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 DNAJC16Q9Y2G8 782 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 MTF2Q9Y483 593 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-222ENST00000561431 SQORQ9Y6N5 450 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 LAMB1P07942 1786 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 PCNTO95613 3336 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 FAM90A20PA6NIJ5 464 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 C2orf81A6NN90 581 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 PEX12O00623 359 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 PRYO14603 147 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 KLK10O43240 276 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 HOXC11O43248 304 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 AHCYL1O43865 530 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 CCNT1O60563 726 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 USP12O75317 370 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 TBCAO75347 108 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 KAT7O95251 611 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 HSPA1AP0DMV8 641 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 HSPA1BP0DMV9 641 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 KRT13P13646 458 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 AKR1A1P14550 325 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 CCNCP24863 283 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 HSPA4P34932 840 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 PNPLA4P41247 253 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 TNNT3P45378 269 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 DCAF7P61962 342 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 TUBA4AP68366 448 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 MRPS21P82921 87 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 MAPK7Q13164 816 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 EFR3AQ14156 821 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 ZNF268Q14587 947 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 DEFB115Q30KQ5 88 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 ATG16L1Q676U5 607 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 MIS18BP1Q6P0N0 1132 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 FBXO42Q6P3S6 717 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 RUFY3Q7L099 469 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 TMTC1Q8IUR5 882 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 VPS52Q8N1B4 723 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 ESX1Q8N693 406 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 ENDOVQ8N8Q3 282 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 NAT8LQ8N9F0 302 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 TRIML1Q8N9V2 468 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 USP38Q8NB14 1042 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 BICD2Q8TD16 824 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 SLC2A12Q8TD20 617 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 DCPSQ96C86 337 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 RITA1Q96K30 269 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 CAPNS2Q96L46 248 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 EFHD1Q9BUP0 239 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 CCDC94Q9BW85 323 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 SIL1Q9H173 461 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 SYNPO2LQ9H987 977 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 JMJD4Q9H9V9 463 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 C6orf203Q9P0P8 240 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 PI4KBQ9UBF8 816 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 SERGEFQ9UGK8 458 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 ZHX1Q9UKY1 873 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 ABT1Q9ULW3 272 aaKnown RBP4.28□□□□□ -1.72
LRRC28-222ENST00000561431 DUSP12Q9UNI6 340 aa4.28□□□□□ -1.72
LRRC28-222ENST00000561431 COG5Q9UP83 839 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms