RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
SNX1-213ENST00000561026 TEX51A0A1B0GUA7 166 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 A0A1W2PQ67 120 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 A0A1W2PQJ5 194 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 TK2O00142 265 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 TNFRSF10CO14798 259 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 ATXN7O15265 892 aaPredicted RBP16.26■□□□□ 0.19
SNX1-213ENST00000561026 MAFKO60675 156 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 KELP23276 732 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 CXADRP78310 365 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 ZNF235Q14590 738 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 ACOX1Q15067 660 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 TDRD12Q587J7 1177 aaKnown RBP16.26■□□□□ 0.19
SNX1-213ENST00000561026 TXNRD3NBQ6F5E7 133 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 PNCKQ6P2M8 343 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 PGBD5Q8N414 524 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 WDR36Q8NI36 951 aaKnown RBP16.26■□□□□ 0.19
SNX1-213ENST00000561026 TEKT4Q8WW24 435 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 KCNE4Q8WWG9 221 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 CCDC74AQ96AQ1 378 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 NUDCD1Q96RS6 583 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 DPH1Q9BZG8 443 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 SHROOM3Q8TF72 1996 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 PMS2P1A4D2B8 440 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 SOCS5O75159 536 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 PBX1P40424 430 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 UCNP55089 124 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 SKOR1P84550 965 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 FANCCQ00597 558 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 BROXQ5VW32 411 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 OGFOD3Q6PK18 319 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 PELI3Q8N2H9 469 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 LSM14AQ8ND56 463 aaKnown RBP16.26■□□□□ 0.19
SNX1-213ENST00000561026 GPR156Q8NFN8 814 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 OR6C4Q8NGE1 309 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 SLC39A7Q92504 469 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 COQ10AQ96MF6 247 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 MGME1Q9BQP7 344 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 LGR4Q9BXB1 951 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 WDR26Q9H7D7 661 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 SYNDIG1Q9H7V2 258 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 NOD2Q9HC29 1040 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 PCDH18Q9HCL0 1135 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 MRPL40Q9NQ50 206 aaKnown RBP16.26■□□□□ 0.19
SNX1-213ENST00000561026 IP6K2Q9UHH9 426 aa16.26■□□□□ 0.19
SNX1-213ENST00000561026 ATMQ13315 3056 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 CCDC187A0A096LP49 1063 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 CDRT15L2A8MXV6 281 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
SNX1-213ENST00000561026 KLK10O43240 276 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 SERPING1P05155 500 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 MLLT3P42568 568 aaPredicted RBP16.25■□□□□ 0.19
SNX1-213ENST00000561026 TMPRSS3P57727 454 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 CCL7P80098 99 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 SLC25A11Q02978 314 aaKnown RBP16.25■□□□□ 0.19
SNX1-213ENST00000561026 RALGPS1Q5JS13 557 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 TAF8Q7Z7C8 310 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 LUZP1Q86V48 1076 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 CBARPQ8N350 705 aaPredicted RBP16.25■□□□□ 0.19
SNX1-213ENST00000561026 BBS5Q8N3I7 341 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 ARL14Q8N4G2 192 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 FAM46DQ8NEK8 389 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 PDCD6IPQ8WUM4 868 aaKnown RBP16.25■□□□□ 0.19
SNX1-213ENST00000561026 BTBD6Q96KE9 485 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 GFM1Q96RP9 751 aaKnown RBP16.25■□□□□ 0.19
SNX1-213ENST00000561026 TMEM168Q9H0V1 697 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 ANAPC7Q9UJX3 599 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
SNX1-213ENST00000561026 ANKRD36A6QL64 1941 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 LRP4O75096 1905 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 A0A087X0T9 212 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 A0A1W2PQM1 296 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 HEXIM1O94992 359 aaKnown RBP16.24■□□□□ 0.19
SNX1-213ENST00000561026 TNFSF15O95150 251 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 CPP00450 1065 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 CYP1A2P05177 515 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 RPLP0P05388 317 aaKnown RBP16.24■□□□□ 0.19
SNX1-213ENST00000561026 FAM228BP0C875 321 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 GLB1P16278 677 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 IL4RP24394 825 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 VIPR1P32241 457 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 SERPINB6P35237 376 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 CDH6P55285 790 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 UBASH3AP57075 661 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 MAXP61244 160 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 TPM4P67936 248 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 ZBED6P86452 979 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 CNGA3Q16281 694 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 FOXR1Q6PIV2 292 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 B3GNT8Q7Z7M8 397 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 ATPAF2Q8N5M1 289 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 NSMCE1Q8WV22 266 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 NUS1Q96E22 293 aa16.24■□□□□ 0.19
SNX1-213ENST00000561026 CCDC97Q96F63 343 aaPredicted RBP16.24■□□□□ 0.19
SNX1-213ENST00000561026 LIN37Q96GY3 246 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms