RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PI4KAP42356 2102 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 C21orf59P57076 290 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 FAM193AP78312 1265 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 ARHGEF7Q14155 803 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 WDR93Q6P2C0 686 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 C4orf22Q6V702 233 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 IFT43Q96FT9 208 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 ERVMER34-1Q9H9K5 563 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 USP29Q9HBJ7 922 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 AASDHPPTQ9NRN7 309 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 ARGLU1Q9NWB6 273 aaPredicted RBP14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 RSPH14Q9UHP6 348 aa14.04□□□□□ -0.16
PKNOX1-209ENST00000560448 CACNA1EQ15878 2313 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 RIF1Q5UIP0 2472 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 CCDC151A5D8V7 595 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 IGLON5A6NGN9 336 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 A6NNZ2 444 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 FPGTO14772 594 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 GCATO75600 419 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 GJB3O75712 270 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 PRLP01236 227 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 ZNF883P0CG24 379 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 C6P13671 934 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 MAT2AP31153 395 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 RABIFP47224 123 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 LIG3P49916 1009 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 GEMP55040 296 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 IRX4P78413 519 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 CDK18Q07002 472 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 SLC14A1Q13336 389 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 ANKRD20A3Q5VUR7 823 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 SEL1L3Q68CR1 1132 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 LIPIQ6XZB0 460 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 KYAT3Q6YP21 454 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 ABI3BPQ7Z7G0 1075 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 HNRNPLLQ8WVV9 542 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 NSMCE3Q96MG7 304 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 RBM15Q96T37 977 aaKnown RBP eCLIP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 EDEM2Q9BV94 578 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 CDH19Q9H159 772 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 EBF2Q9HAK2 575 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 FEZ2Q9UHY8 353 aaPredicted RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 ITM2BQ9Y287 266 aa14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 DRG1Q9Y295 367 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-209ENST00000560448 GON4LQ3T8J9 2241 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 A0A1W2PR77 199 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 TTC24A2A3L6 582 aaPredicted RBP14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 RGSL1A5PLK6 1076 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 SLC31A1O15431 190 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 PSMD3O43242 534 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 LZTS3O60299 673 aaPredicted RBP14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 CEP104O60308 925 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 HEXIM1O94992 359 aaKnown RBP14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 NDST3O95803 873 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 PAK4O96013 591 aaPredicted RBP14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 PYGLP06737 847 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 PDHA1P08559 390 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 ENGP17813 658 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 NFKB1P19838 968 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 HLA-DPA1P20036 260 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 CD68P34810 354 aaPredicted RBP14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 YPEL5P62699 121 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 VSNL1P62760 191 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 RALGDSQ12967 914 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 LRRC14Q15048 493 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 OASLQ15646 514 aaKnown RBP14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 LONRF2Q1L5Z9 754 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 PARP6Q2NL67 630 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 NLRP8Q86W28 1048 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 KLHDC8BQ8IXV7 354 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 CCHCR1Q8TD31 782 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 CENPTQ96BT3 561 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 KLHDC7BQ96G42 594 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 SLC6A18Q96N87 628 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 TRIB3Q96RU7 358 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 FSD1LQ9BXM9 530 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 CEP41Q9BYV8 373 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 TRABDQ9H4I3 376 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 MAGEE1Q9HCI5 957 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 TMEM9BQ9NQ34 198 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 GDF3Q9NR23 364 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 RAD18Q9NS91 495 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 HACD3Q9P035 362 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 B4GALT6Q9UBX8 382 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 CHKBQ9Y259 395 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 ANKRD6Q9Y2G4 727 aa14.02□□□□□ -0.16
PKNOX1-209ENST00000560448 PCDH15Q96QU1 1955 aa14.02□□□□□ -0.17
PKNOX1-209ENST00000560448 ZFHX2Q9C0A1 2572 aaPredicted RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 PLXNA2O75051 1894 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 GOLGA6L10A0A0M3HER8 536 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 LOC285095A0A1B0GVY8 99 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 ERI2A8K979 691 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 PATE3B3GLJ2 98 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 TLR4O00206 839 aa14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 PGRMC1O00264 195 aaKnown RBP14.01□□□□□ -0.17
PKNOX1-209ENST00000560448 MMP20O60882 483 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms