RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 TPSB2P20231 275 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 HNRNPA2B1P22626 353 aaKnown RBP10.1□□□□□ -0.79
USP3-216ENST00000559873 MAT2AP31153 395 aaKnown RBP10.1□□□□□ -0.79
USP3-216ENST00000559873 HNF1BP35680 557 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 PTGER3P43115 390 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 LIG3P49916 1009 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 PDE1BQ01064 536 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 CREB5Q02930 508 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 CDH17Q12864 832 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 RALGDSQ12967 914 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 LAMB3Q13751 1172 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 ACOX1Q15067 660 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 TEAD4Q15561 434 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 TPSAB1Q15661 275 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 CNGA3Q16281 694 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 SIRPB2Q5JXA9 342 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 SEL1L3Q68CR1 1132 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 LRRC66Q68CR7 880 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 KDELC2Q7Z4H8 507 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 GLT6D1Q7Z4J2 308 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 MAATS1Q7Z4T9 603 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 PCGF5Q86SE9 256 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 CTAGE6Q86UF2 777 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 JAMLQ86YT9 394 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 SLC41A1Q8IVJ1 513 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 CTAGE4Q8IX94 777 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 TAB3Q8N5C8 712 aaPredicted RBP10.1□□□□□ -0.79
USP3-216ENST00000559873 SLC25A41Q8N5S1 370 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
USP3-216ENST00000559873 CEP112Q8N8E3 955 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 DNAAF3Q8N9W5 541 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 CEP76Q8TAP6 659 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 KRT12Q99456 494 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 GORASP1Q9BQQ3 440 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 C1QTNF2Q9BXJ5 285 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 SLC17A9Q9BYT1 436 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 GPR63Q9BZJ6 419 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 MIR1-1HGQ9H1L0 117 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 ZFYVE1Q9HBF4 777 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 ETNK1Q9HBU6 452 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 MAGEE1Q9HCI5 957 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 NCDNQ9UBB6 729 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 EIF2B4Q9UI10 523 aaKnown RBP10.1□□□□□ -0.79
USP3-216ENST00000559873 GGT7Q9UJ14 662 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 ZNF711Q9Y462 761 aa10.1□□□□□ -0.79
USP3-216ENST00000559873 A0A1B0GTW7 788 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 RGSL1A5PLK6 1076 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 FAM187AA6NFU0 413 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 IGLON5A6NGN9 336 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 C2orf81A6NN90 581 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 PROB1E7EW31 1015 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 SMAPO00193 183 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 FPGTO14772 594 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 WNT9AO14904 365 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 FOXD2O60548 495 aaPredicted RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 MMP20O60882 483 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 SUN1O94901 812 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 CRTAMO95727 393 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 AGTP01019 485 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ZSCAN5DPP0CG00 497 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ITPKAP23677 461 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ADRA1AP35348 466 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ADCY8P40145 1251 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 AFF3P51826 1226 aaKnown RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 RACK1P63244 317 aaKnown RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 NHLH1Q02575 133 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 C2orf54Q08AI8 447 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 OVGP1Q12889 678 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 IHHQ14623 411 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 STAT4Q14765 748 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 AGERQ15109 404 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 TRIP13Q15645 432 aaPredicted RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 LPAL2Q16609 132 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 PEAR1Q5VY43 1037 aaPredicted RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 ZDHHC20Q5W0Z9 365 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 DENND2CQ68D51 928 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 KCTD11Q693B1 232 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 C8orf74Q6P047 294 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 RANBP10Q6VN20 620 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 LIPIQ6XZB0 460 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ZCCHC9Q8N567 271 aaKnown RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 GLIS1Q8NBF1 620 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 SUMF1Q8NBK3 374 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 BBOF1Q8ND07 529 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 BLOC1S5Q8TDH9 187 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 DNASE2BQ8WZ79 361 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 PIGKQ92643 395 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 NUS1Q96E22 293 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 SERAC1Q96JX3 654 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 HINFPQ9BQA5 517 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 APOL2Q9BQE5 337 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 RAB17Q9H0T7 212 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 CDH19Q9H159 772 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ARNT2Q9HBZ2 717 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 XAB2Q9HCS7 855 aaKnown RBP10.09□□□□□ -0.79
USP3-216ENST00000559873 AASDHPPTQ9NRN7 309 aa10.09□□□□□ -0.79
USP3-216ENST00000559873 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
USP3-216ENST00000559873 A6NNZ2 444 aa10.08□□□□□ -0.8
USP3-216ENST00000559873 A8MX80 341 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms