RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 KLC1Q07866 573 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 CTBP1Q13363 440 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TRIM29Q14134 588 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 KCNJ12Q14500 433 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 KPNB1Q14974 876 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 E2F5Q15329 346 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 SPA17Q15506 151 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 ASTE1Q2TB18 679 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 PTCHD3Q3KNS1 767 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 ZACNQ401N2 412 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 USH1GQ495M9 461 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 PLA1AQ53H76 456 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 WASHC2DQ5SRD0 308 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 C10orf76Q5T2E6 689 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 ZNF658Q5TYW1 1059 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 WDR78Q5VTH9 848 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 DENND2CQ68D51 928 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 LMBRD2Q68DH5 695 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 OR52E8Q6IFG1 317 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 FAM180BQ6P0A1 224 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 CPLX4Q7Z7G2 160 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 MOGAT3Q86VF5 341 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 HEATR4Q86WZ0 1026 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 RAB11FIP4Q86YS3 637 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 FAM114A1Q8IWE2 563 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 ADHFE1Q8IWW8 467 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 SPARTQ8N0X7 666 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TMTC2Q8N394 836 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 PAF1Q8N7H5 531 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 SPATA5Q8NB90 893 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 NGDNQ8NEJ9 315 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TBC1D16Q8TBP0 767 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 ACTRT1Q8TDG2 376 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 ATP8B4Q8TF62 1192 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 SCFD2Q8WU76 684 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TEKT4Q8WW24 435 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TRIM43Q96BQ3 446 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 RRP36Q96EU6 259 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 THOC1Q96FV9 657 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 DHTKD1Q96HY7 919 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 HS6ST2Q96MM7 605 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 AGAP3Q96P47 875 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 INPP4AQ96PE3 977 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 NR1H4Q96RI1 486 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 SMC6Q96SB8 1091 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 IWS1Q96ST2 819 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 SEC62Q99442 399 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 CHP1Q99653 195 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TIPINQ9BVW5 301 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 COLEC11Q9BWP8 271 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TRIM7Q9C029 511 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 MS4A7Q9GZW8 240 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 VCX3BQ9H321 246 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 NHEJ1Q9H9Q4 299 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 RNPEPL1Q9HAU8 725 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 MAGEF1Q9HAY2 307 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 VCX3AQ9NNX9 186 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 FAM114A2Q9NRY5 505 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 EXOC1Q9NV70 894 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 PANK4Q9NVE7 773 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 PIH1D1Q9NWS0 290 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 IL1RAPL1Q9NZN1 696 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 AIPL1Q9NZN9 384 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 NDUFA13Q9P0J0 144 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 HDAC6Q9UBN7 1215 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 HEY2Q9UBP5 337 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 DBNLQ9UJU6 430 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 OGDHLQ9ULD0 1010 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 TTC7AQ9ULT0 858 aaPredicted RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 MAFFQ9ULX9 164 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.85□□□□□ -1.79
AP3S2-210ENST00000559601 MYH7BA7E2Y1 1941 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 USP6P35125 1406 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 NWD1Q149M9 1564 aa3.85□□□□□ -1.79
AP3S2-210ENST00000559601 RIMBP3CA6NJZ7 1639 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 RIMBP3BA6NNM3 1639 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 RIMBP3Q9UFD9 1639 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 C4AP0C0L4 1744 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 C4BP0C0L5 1744 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 PARP4Q9UKK3 1724 aaKnown RBP3.84□□□□□ -1.79
AP3S2-210ENST00000559601 MYO5AQ9Y4I1 1855 aaKnown RBP3.84□□□□□ -1.79
AP3S2-210ENST00000559601 A0A087WWL8 130 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 KLF18A0A0U1RQI7 1052 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 BICDL2A1A5D9 508 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 DPPA5A6NC42 116 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 CCDC169A6NNP5 214 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 BIRC5O15392 142 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 SNX3O60493 162 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 SRGAP2O75044 1071 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 CIAO1O76071 339 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 HEXIM1O94992 359 aaKnown RBP3.84□□□□□ -1.79
AP3S2-210ENST00000559601 AGTP01019 485 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 MMP1P03956 469 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 CTSAP10619 480 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 PSG1P11464 419 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 SP100P23497 879 aaPredicted RBP3.84□□□□□ -1.79
AP3S2-210ENST00000559601 PRKAR1BP31321 381 aa3.84□□□□□ -1.79
AP3S2-210ENST00000559601 HSD17B3P37058 310 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms