RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 DEFB106AQ8N104 65 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 CISD2Q8N5K1 135 aaKnown RBP9.7□□□□□ -0.86
SMAD3-211ENST00000559460 KIAA0895Q8NCT3 520 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 PATE1Q8WXA2 126 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 FUBP1Q96AE4 644 aaKnown RBP9.7□□□□□ -0.86
SMAD3-211ENST00000559460 HMCESQ96FZ2 354 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 ILKAPQ9H0C8 392 aaPredicted RBP9.7□□□□□ -0.86
SMAD3-211ENST00000559460 ACTL8Q9H568 366 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 WDCPQ9H6R7 721 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 MLXIPLQ9NP71 852 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 MPP6Q9NZW5 540 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 PADI1Q9ULC6 663 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 TRAF3IP3Q9Y228 551 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 PCDHGA6Q9Y5G7 932 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 COPG1Q9Y678 874 aaKnown RBP9.7□□□□□ -0.86
SMAD3-211ENST00000559460 ADGRG4Q8IZF6 3080 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 CHD5Q8TDI0 1954 aa9.7□□□□□ -0.86
SMAD3-211ENST00000559460 E5RJQ4 531 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 PPM1DO15297 605 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 POLR2DO15514 142 aaKnown RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 TEX33O43247 280 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 LRP4O75096 1905 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 SNRPB2P08579 225 aaKnown RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 EPB41P11171 864 aaKnown RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 CD1EP15812 388 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ITIH2P19823 946 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 GNPDA1P46926 289 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 LIG3P49916 1009 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 RPS15P62841 145 aaKnown RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 GNA12Q03113 381 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ADAM9Q13443 819 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 UGT8Q16880 541 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 VWA2Q5GFL6 755 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 HIVEP3Q5T1R4 2406 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ACBD5Q5T8D3 534 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ARHGAP22Q7Z5H3 698 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ZNF354CQ86Y25 554 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 DRC7Q8IY82 874 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 NXPE1Q8N323 547 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 TNRC6AQ8NDV7 1962 aaKnown RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 CCDC47Q96A33 483 aaKnown RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 RNF31Q96EP0 1072 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 TKTL2Q9H0I9 626 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 CHST11Q9NPF2 352 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 GPR83Q9NYM4 423 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 TMEM63CQ9P1W3 806 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 PDP2Q9P2J9 529 aa9.69□□□□□ -0.86
SMAD3-211ENST00000559460 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
SMAD3-211ENST00000559460 ABCA2Q9BZC7 2435 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 MED7O43513 233 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 HSF2BPO75031 334 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 SRGAP2O75044 1071 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ZMPSTE24O75844 475 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 GLI1P08151 1106 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 BMP6P22004 513 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 AK4P27144 223 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ACTR1BP42025 376 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ACTR1AP61163 376 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 EIF4EBP2Q13542 120 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 AGERQ15109 404 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 BRMS1LQ5PSV4 323 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ATXN7L2Q5T6C5 722 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 LYPLAL1Q5VWZ2 237 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 FAM173BQ6P4H8 233 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 SYVN1Q86TM6 617 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 CDH24Q86UP0 819 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ZNF761Q86XN6 746 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 NAGSQ8N159 534 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 PLA2G15Q8NCC3 412 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ST6GALNAC3Q8NDV1 305 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 CT55Q8WUE5 264 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ELMO2Q96JJ3 720 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 USP28Q96RU2 1077 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 PHPT1Q9NRX4 125 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 TRNAU1APQ9NX07 287 aaKnown RBP9.68□□□□□ -0.86
SMAD3-211ENST00000559460 OSGIN2Q9Y236 505 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 ACTL7AQ9Y615 435 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
SMAD3-211ENST00000559460 MED13LQ71F56 2210 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 CXorf51AA0A1B0GTR3 108 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 A0A1B0GUH1 482 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 F5H423 210 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-211ENST00000559460 ZNF185O15231 689 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 THAP12O43422 761 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 GRAP2O75791 330 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 FAM155BO75949 473 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 PLEKP08567 350 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-211ENST00000559460 HOXC4P09017 264 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-211ENST00000559460 ELFN1P0C7U0 828 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 MYCLP1P12525 358 aaPredicted RBP9.67□□□□□ -0.86
SMAD3-211ENST00000559460 ZNF28P17035 718 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 BPIP17213 487 aa9.67□□□□□ -0.86
SMAD3-211ENST00000559460 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms