RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 GSDMCQ9BYG8 508 aa12.39□□□□□ -0.43
TRPM1-210ENST00000559179 CARS2Q9HA77 564 aaKnown RBP12.39□□□□□ -0.43
TRPM1-210ENST00000559179 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
TRPM1-210ENST00000559179 STARD5Q9NSY2 213 aa12.39□□□□□ -0.43
TRPM1-210ENST00000559179 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
TRPM1-210ENST00000559179 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 C9orf172C9J069 976 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 STMND1H3BQB6 276 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 BUB1BO60566 1050 aaPredicted RBP12.38□□□□□ -0.43
TRPM1-210ENST00000559179 CPNE6O95741 557 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 CHRNB2P17787 502 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 MMP12P39900 470 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 KLK7P49862 253 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 PAPOLAP51003 745 aaKnown RBP12.38□□□□□ -0.43
TRPM1-210ENST00000559179 SCNN1BP51168 640 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 NDST2P52849 883 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
TRPM1-210ENST00000559179 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRPM1-210ENST00000559179 C16orf72Q14CZ0 275 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 KCTD16Q68DU8 428 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 PNCKQ6P2M8 343 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
TRPM1-210ENST00000559179 NRSN1Q8IZ57 195 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 UMODL1-AS1Q8N2C9 162 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 C3orf20Q8ND61 904 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 RCBTB1Q8NDN9 531 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 VOPP1Q96AW1 172 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 MCEEQ96PE7 176 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 SLC25A18Q9H1K4 315 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 PHPT1Q9NRX4 125 aaPredicted RBP12.38□□□□□ -0.43
TRPM1-210ENST00000559179 NEU3Q9UQ49 428 aa12.38□□□□□ -0.43
TRPM1-210ENST00000559179 UNC13CQ8NB66 2214 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 TSPAN11A1L157 253 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 PRSS38A1L453 326 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 CFAP69A5D8W1 941 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 WASH4PA8MWX3 477 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 EEF2KO00418 725 aaKnown RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 SUV39H1O43463 412 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 PRAMEF11O60813 436 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 UNGP13051 313 aaPredicted RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 CCL4P13236 92 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 NFKBIAP25963 317 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 NOP2P46087 812 aaKnown RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 GNPDA1P46926 289 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 ZNF143P52747 638 aaPredicted RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 AIF1P55008 147 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 PEX6Q13608 980 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 AGERQ15109 404 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 COLEC12Q5KU26 742 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 SLC30A9Q6PML9 568 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 LIPIQ6XZB0 460 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 ZSWIM9Q86XI8 627 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 NEK11Q8NG66 645 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 NUS1Q96E22 293 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 AHCYL2Q96HN2 611 aaKnown RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 TAAR9Q96RI9 348 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 CNPY3Q9BT09 278 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 LGR4Q9BXB1 951 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 SLC39A8Q9C0K1 460 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 GANQ9H2C0 597 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 DHX35Q9H5Z1 703 aaKnown RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 SPATS2LQ9NUQ6 558 aaKnown RBP12.37□□□□□ -0.43
TRPM1-210ENST00000559179 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 ATMQ13315 3056 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 LRP4O75096 1905 aa12.37□□□□□ -0.43
TRPM1-210ENST00000559179 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
TRPM1-210ENST00000559179 B4GAT1O43505 415 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 ECEL1O95672 775 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 CCNB1P14635 433 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 ITGB6P18564 788 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 MPSTP25325 297 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 CCR10P46092 362 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 RENBPP51606 427 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 B4GALNT1Q00973 533 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 TLE1Q04724 770 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 DOK6Q6PKX4 331 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 DPPA4Q7L190 304 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 FAM129CQ86XR2 697 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 PHF13Q86YI8 300 aaPredicted RBP12.36□□□□□ -0.43
TRPM1-210ENST00000559179 SLITRK4Q8IW52 837 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 CCDC74BQ96LY2 380 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 NUDT22Q9BRQ3 303 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 GEMIN8Q9NWZ8 242 aaKnown RBP12.36□□□□□ -0.43
TRPM1-210ENST00000559179 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 TAAR2Q9P1P5 351 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 PCSK1NQ9UHG2 260 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 AP4E1Q9UPM8 1137 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
TRPM1-210ENST00000559179 SCN8AQ9UQD0 1980 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms