RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MRPL1Q9BYD6 325 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 SLC35C2Q9NQQ7 365 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 DECR2Q9NUI1 292 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 MSRB1Q9NZV6 116 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 MARCH4Q9P2E8 410 aaPredicted RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 LSM4Q9Y4Z0 139 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 SRPRBQ9Y5M8 271 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 KAT6BQ8WYB5 2073 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 TTBK1Q5TCY1 1321 aaPredicted RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 IKBKBO14920 756 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 CLDN7O95471 211 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 GABRB1P18505 474 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 ITGAXP20702 1163 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 IL11P20809 199 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 TBXAS1P24557 533 aaPredicted RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 MPGP29372 298 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 ACSL1P33121 698 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 SHMT1P34896 483 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 SLC15A1P46059 708 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 CAMPP49913 170 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 NEDD9Q14511 834 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 PSMD6Q15008 389 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 ASTE1Q2TB18 679 aaPredicted RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 COL28A1Q2UY09 1125 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 SUPT20HL1Q3ZLR7 823 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 CXorf66Q5JRM2 361 aaPredicted RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 Q5PR19 223 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 PRAMEF19Q5SWL8 479 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 PLEKHA7Q6IQ23 1121 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 LRRC8EQ6NSJ5 796 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 SEPT14Q6ZU15 432 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 YTHDF3Q7Z739 585 aaKnown RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 WDR63Q8IWG1 891 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 PARP16Q8N5Y8 322 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 POC5Q8NA72 575 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 HUS1BQ8NHY5 278 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 SLC41A2Q96JW4 573 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 MMTAG2Q9BU76 263 aaKnown RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 TXLNGYQ9BZA5 131 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 LHPPQ9H008 270 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 OSGEPL1Q9H4B0 414 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 CATSPERBQ9H7T0 1116 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 PSD3Q9NYI0 1048 aa4.54□□□□□ -1.68
CASC4-206ENST00000558847 CWC15Q9P013 229 aaKnown RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 UBA2Q9UBT2 640 aaPredicted RBP4.54□□□□□ -1.68
CASC4-206ENST00000558847 A0A0G2JK05 382 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CTDSP2O14595 271 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 KLK8O60259 260 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 DKC1O60832 514 aaKnown RBP eCLIP4.53□□□□□ -1.68
CASC4-206ENST00000558847 GPC4O75487 556 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CBSLP0DN79 551 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CHRNB2P17787 502 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 EDN2P20800 178 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CBSP35520 551 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 KCNJ4P48050 445 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 MFAP4P55083 255 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 RRP1P56182 461 aaKnown RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 GRIK3Q13003 919 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 IKQ13123 557 aaPredicted RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 PRPF4BQ13523 1007 aaKnown RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 NAE1Q13564 534 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CAPSQ13938 189 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 IRF3Q14653 427 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 EZH2Q15910 746 aaKnown RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 SOWAHAQ2M3V2 549 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 PARM1Q6UWI2 310 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 MCEMP1Q8IX19 187 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 ZBTB2Q8N680 514 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 POMGNT2Q8NAT1 580 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 TMEM174Q8WUU8 243 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 NSMCE1Q8WV22 266 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 PRPF31Q8WWY3 499 aaKnown RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 LPAR1Q92633 364 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 SH3GL2Q99962 352 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 QTRT1Q9BXR0 403 aaKnown RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 CYSLTR2Q9NS75 346 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 TMEM184CQ9NVA4 438 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CPSF2Q9P2I0 782 aaKnown RBP4.53□□□□□ -1.68
CASC4-206ENST00000558847 COPG2Q9UBF2 871 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 FBXL17Q9UF56 701 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 CEPT1Q9Y6K0 416 aa4.53□□□□□ -1.68
CASC4-206ENST00000558847 TMEM202A6NGA9 273 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 LRRC72A6NJI9 287 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 FAM90A8PA6NJQ4 464 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 GLOD5A6NK44 160 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 KCNU1A8MYU2 1149 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 JRKO75564 520 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 ERAL1O75616 437 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 PGM3O95394 542 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 HIST1H2ABP04908 130 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 FAM90A13PP0C7W8 464 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 FAM90A24PP0C7X0 464 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 HIST1H2ADP20671 130 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 KELP23276 732 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 HOXC9P31274 260 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 PRCPP42785 496 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms