RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 HMX2A2RU54 273 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 FFAR3O14843 346 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 GPR42O15529 346 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 MAP3K13O43283 966 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 IGFBP6P24592 240 aaPredicted RBP15.5■□□□□ 0.07
AP4E1-202ENST00000558439 CD68P34810 354 aaPredicted RBP15.5■□□□□ 0.07
AP4E1-202ENST00000558439 GPR15P49685 360 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 CEP97Q8IW35 865 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 KBTBD2Q8IY47 623 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 OR7D4Q8NG98 312 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 OR13C4Q8NGS5 318 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 OR6K2Q8NGY2 324 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 NSMCE2Q96MF7 247 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 EP400Q96L91 3159 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ZCWPW2A0A1B0GU75 182 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 CAPN14A8MX76 684 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ASGR1P07306 291 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 MBL2P11226 248 aaPredicted RBP15.5■□□□□ 0.07
AP4E1-202ENST00000558439 IL23RQ5VWK5 629 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 TXNDC5Q8NBS9 432 aaKnown RBP15.5■□□□□ 0.07
AP4E1-202ENST00000558439 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 SNX19Q92543 992 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 MKS1Q9NXB0 559 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ARL5AQ9Y689 179 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ZNF487B1APH4 448 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 E7ENX8 843 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 GABBR2O75899 941 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ALDH1A2O94788 518 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 RECQLP46063 649 aaPredicted RBP15.5■□□□□ 0.07
AP4E1-202ENST00000558439 ARHGDIAP52565 204 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 CCNIQ14094 377 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 PPP1R3AQ16821 1122 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 HS6ST3Q8IZP7 471 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 CNTD1Q8N815 330 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 RIN3Q8TB24 985 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 MTFMTQ96DP5 389 aaKnown RBP15.5■□□□□ 0.07
AP4E1-202ENST00000558439 SORT1Q99523 831 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 TRIM54Q9BYV2 358 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 PCDHGC4Q9Y5F7 938 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 TLL2Q9Y6L7 1015 aa15.5■□□□□ 0.07
AP4E1-202ENST00000558439 GLTPD2A6NH11 291 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 PIK3CGP48736 1102 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 FLT3LGP49771 235 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 IL2P60568 153 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 REP15Q6BDI9 236 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 EFL1Q7Z2Z2 1120 aaKnown RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 MILR1Q7Z6M3 343 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 ADCY4Q8NFM4 1077 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 ZFRQ96KR1 1074 aaKnown RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 ADGRE3Q9BY15 652 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 RUBCNLQ9H714 662 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 COQ10BQ9H8M1 238 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 NMRK2Q9NPI5 230 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 NUP205Q92621 2012 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 A8MT66 165 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 FKBP9O95302 570 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 HIST1H2AGP0C0S8 130 aaPredicted RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 HIST1H2ADP20671 130 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 PRDX6P30041 224 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 PBX3P40426 434 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 TRIM25Q14258 630 aaKnown RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 GRB14Q14449 540 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 CNPY1Q3B7I2 92 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 GDF6Q6KF10 455 aaPredicted RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 FKBP9P1Q75LS8 142 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 SOCS4Q8WXH5 440 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 IRGQQ8WZA9 623 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 HIST1H2AHQ96KK5 128 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 HIST1H2AJQ99878 128 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 PKP2Q99959 881 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 H2AFJQ9BTM1 129 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 TRPM5Q9NZQ8 1165 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 VPS9D1Q9Y2B5 631 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 DHRS12A0PJE2 317 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 TBKBP1A7MCY6 615 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 AURKAO14965 403 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 CNTN5O94779 1100 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 GOT2P00505 430 aaKnown RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 ELNP15502 786 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 CTPS1P17812 591 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 HNRNPDQ14103 355 aaKnown RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 B3GNT6Q6ZMB0 384 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 OR56A4Q8NGH8 313 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 VPS45Q9NRW7 570 aa15.49■□□□□ 0.07
AP4E1-202ENST00000558439 TRMT13Q9NUP7 481 aaKnown RBP15.49■□□□□ 0.07
AP4E1-202ENST00000558439 SH3BGRLO75368 114 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 LDLRP01130 860 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 SLC35E2BP0CK96 405 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 GRAMD4Q6IC98 578 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 ZNF483Q8TF39 744 aaPredicted RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 SLC2A13Q96QE2 648 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 ATP5C1P36542 298 aaKnown RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 HCAR3P49019 387 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 PPM1FP49593 454 aaPredicted RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 ADGRE1Q14246 886 aa15.48■□□□□ 0.07
AP4E1-202ENST00000558439 CWF19L1Q69YN2 538 aaKnown RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 KIAA0930Q6ICG6 404 aaPredicted RBP15.48■□□□□ 0.07
AP4E1-202ENST00000558439 LINGO4Q6UY18 593 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms