RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
TPM1-212ENST00000558347 TP53BP1Q12888 1972 aaPredicted RBP10.41□□□□□ -0.74
TPM1-212ENST00000558347 TCP11X1B4DZS4 312 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 FAM72CH0Y354 149 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 APOC4-APOC2K7ER74 178 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 PRPF4O43172 522 aaKnown RBP eCLIP10.4□□□□□ -0.743e-6■■□□□ 14.1
TPM1-212ENST00000558347 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 BNIP3LO60238 219 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 CST8O60676 142 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 TOP3BO95985 862 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 APOC2P02655 101 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 ZFXP17010 805 aaPredicted RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 GOT1P17174 413 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 C5AR1P21730 350 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 TGM2P21980 687 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 AFF3P51826 1226 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 ADPRHP54922 357 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 CCDC15Q0P6D6 951 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 RIPK1Q13546 671 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 SPRED3Q2MJR0 410 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 POM121L1PQ3SYA9 428 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 GALNTL6Q49A17 601 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 CCDC38Q502W7 563 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 PPP6R3Q5H9R7 873 aaPredicted RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 FAM72AQ5TYM5 149 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 MANEALQ5VSG8 457 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 KAZNQ674X7 775 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 FAM72DQ6L9T8 149 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 RGS9BPQ6ZS82 235 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 GSTA5Q7RTV2 222 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 CCDC91Q7Z6B0 441 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 FAM72BQ86X60 149 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 RFX6Q8HWS3 928 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 PYROXD2Q8N2H3 581 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 PQLC3Q8N755 202 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 DCAF4L2Q8NA75 395 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 ATP11CQ8NB49 1132 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 OR2T34Q8NGX1 318 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 PCDH19Q8TAB3 1148 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 OR8D1Q8WZ84 308 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 CAMK1GQ96NX5 476 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 CSPG4P5Q96PW8 444 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 C2orf49Q9BVC5 232 aaPredicted RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 MAK16Q9BXY0 300 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 ZYG11BQ9C0D3 744 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 SLC32A1Q9H598 525 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 GAREM1Q9H706 876 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 NDFIP2Q9NV92 336 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 PPARGC1AQ9UBK2 798 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 OR12D3Q9UGF7 316 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 SLC24A2Q9UI40 661 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 ANGPTL2Q9UKU9 493 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 TPX2Q9ULW0 747 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 WASF3Q9UPY6 502 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 NEU3Q9UQ49 428 aa10.4□□□□□ -0.74
TPM1-212ENST00000558347 FNDC3AQ9Y2H6 1198 aaKnown RBP10.4□□□□□ -0.74
TPM1-212ENST00000558347 AKAP13Q12802 2813 aa10.4□□□□□ -0.75
TPM1-212ENST00000558347 SPAARA0A1B0GVQ0 90 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 A0A1W2PPC4 97 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 ILVBLA1L0T0 632 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 LRRC72A6NJI9 287 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 RNF103O00237 685 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 APOL1O14791 398 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 MCF2LO15068 1137 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SH3BP5O60239 455 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 ZMPSTE24O75844 475 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 CTSLP07711 333 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 TSHRP16473 764 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 STX2P32856 288 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SKIV2L2P42285 1042 aaKnown RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 GRIA4P48058 902 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 PPP2CBP62714 309 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 PPP2CAP67775 309 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 IL9RQ01113 521 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SFSWAPQ12872 951 aaKnown RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 FOXC1Q12948 553 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SLC14A1Q13336 389 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 DPYSQ14117 519 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 LLGL1Q15334 1064 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 TRIP13Q15645 432 aaPredicted RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 OASLQ15646 514 aaKnown RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 KIF19Q2TAC6 998 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 HLA-BQ31612 363 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 P3H1Q32P28 736 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 SPATA21Q7Z572 469 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 PLD5Q8N7P1 536 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 CCDC63Q8NA47 563 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 OR2A12Q8NGT7 310 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 OR14C36Q8NHC7 312 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 PIP4K2CQ8TBX8 421 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 MAML1Q92585 1016 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SLC6A18Q96N87 628 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 RBM15Q96T37 977 aaKnown RBP eCLIP10.39□□□□□ -0.752e-7■■□□□ 13.8
TPM1-212ENST00000558347 EPAS1Q99814 870 aa10.39□□□□□ -0.75
TPM1-212ENST00000558347 SSU72Q9NP77 194 aaKnown RBP10.39□□□□□ -0.75
TPM1-212ENST00000558347 KCNK9Q9NPC2 374 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms