RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 A0A1W2PQ67 120 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 TRABD2BA6NFA1 517 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 A8MX80 341 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 ZNF487B1APH4 448 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 H3BM21 787 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 AQP9O43315 295 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 FZD6O60353 706 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 GCATO75600 419 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PGLSO95336 258 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 ELFN1P0C7U0 828 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 ALPPL2P10696 532 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 CKMT1AP12532 417 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 CCNCP24863 283 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 MAGEA1P43355 309 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 ZNF75DP51815 510 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 MTM1Q13496 603 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 NFATC4Q14934 902 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PTPRRQ15256 657 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 IFI16Q16666 785 aaKnown RBP8.81□□□□□ -1
SNRPA1-206ENST00000558059 LRRC38Q5VT99 294 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 ALG1LQ6GMV1 187 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 VSIG1Q86XK7 387 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PHACTR4Q8IZ21 702 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PELI3Q8N2H9 469 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PLD5Q8N7P1 536 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 LMX1AQ8TE12 382 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PDCD6IPQ8WUM4 868 aaKnown RBP8.81□□□□□ -1
SNRPA1-206ENST00000558059 BTN2A2Q8WVV5 523 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PIH1D2Q8WWB5 315 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 FUBP1Q96AE4 644 aaKnown RBP8.81□□□□□ -1
SNRPA1-206ENST00000558059 APOLD1Q96LR9 279 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 TBATAQ96M53 351 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 COQ10AQ96MF6 247 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 SEMA3CQ99985 751 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 DUSP23Q9BVJ7 150 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 CLPBQ9H078 707 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 RBM22Q9NW64 420 aaKnown RBP eCLIP8.81□□□□□ -13e-9■■■■■ 38.6
SNRPA1-206ENST00000558059 DTLQ9NZJ0 730 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 SPASTQ9UBP0 616 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 PPIL1Q9Y3C6 166 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 HYOU1Q9Y4L1 999 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 OR1A2Q9Y585 309 aa8.81□□□□□ -1
SNRPA1-206ENST00000558059 ZFC3H1O60293 1989 aaKnown RBP8.81□□□□□ -1
SNRPA1-206ENST00000558059 LRRD1A4D1F6 860 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 NPIPB15A6NHN6 443 aaPredicted RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 SRRM3A6NNA2 597 aaPredicted RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 LMO7DNF2Z398 122 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 TPP1O14773 563 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 HEXIM1O94992 359 aaKnown RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 LCA5LO95447 670 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 CPP00450 1065 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 PCCBP05166 539 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 HLA-DQB2P05538 268 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 PDHA1P08559 390 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 HOXC4P09017 264 aaPredicted RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 CCNB1P14635 433 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 JUPP14923 745 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 TSHRP16473 764 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 MX2P20592 715 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 COMTP21964 271 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 LHCGRP22888 699 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 CES1P23141 567 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 VIPR1P32241 457 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 TRIM23P36406 574 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 SLC1A1P43005 524 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 HADHBP55084 474 aaKnown RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 DAB2P98082 770 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 E2F1Q01094 437 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 DSC2Q02487 901 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 PPARDQ03181 441 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 NIPAL4Q0D2K0 466 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 TARDBPQ13148 414 aaKnown RBP eCLIP8.8□□□□□ -1
SNRPA1-206ENST00000558059 C1orf61Q13536 156 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 ACOX1Q15067 660 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 CNGA3Q16281 694 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 ALG11Q2TAA5 492 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 DEFB133Q30KQ1 61 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 HS1BP3Q53T59 392 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 PRRT3Q5FWE3 981 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 ZFYVE27Q5T4F4 411 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 ARMC12Q5T9G4 340 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 FAXCQ5TGI0 409 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 HES3Q5TGS1 186 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 KCTD16Q68DU8 428 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 SLC9A4Q6AI14 798 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 TIGD7Q6NT04 549 aaPredicted RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 ZCCHC8Q6NZY4 707 aaKnown RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 ENPP7Q6UWV6 458 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 GAS2L3Q86XJ1 694 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 CACTIN-AS1Q8N1I8 211 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 PAF1Q8N7H5 531 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 ARRDC2Q8TBH0 407 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 MDM1Q8TC05 714 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 TSACCQ96A04 125 aaPredicted RBP8.8□□□□□ -1
SNRPA1-206ENST00000558059 HDAC11Q96DB2 347 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 SCRN2Q96FV2 425 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 MRFAP1L1Q96HT8 127 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 SMIM14Q96QK8 99 aa8.8□□□□□ -1
SNRPA1-206ENST00000558059 MCCC1Q96RQ3 725 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms