RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GOLGA6L10A0A0M3HER8 536 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 HEXIM1O94992 359 aaKnown RBP25.62■■□□□ 1.69
SMAD6-202ENST00000557916 ETS1P14921 441 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 LHCGRP22888 699 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 ARHGEF7Q14155 803 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 STAT4Q14765 748 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 CNGA3Q16281 694 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 TCEAL6Q6IPX3 200 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 CRTC1Q6UUV9 634 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 TSPAN33Q86UF1 283 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 CREG2Q8IUH2 290 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 C12orf50Q8NA57 414 aaPredicted RBP25.62■■□□□ 1.69
SMAD6-202ENST00000557916 TCEAL3Q969E4 200 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 C16orf45Q96MC5 204 aaPredicted RBP25.62■■□□□ 1.69
SMAD6-202ENST00000557916 LENG8Q96PV6 779 aaPredicted RBP25.62■■□□□ 1.69
SMAD6-202ENST00000557916 FSD1LQ9BXM9 530 aa25.62■■□□□ 1.69
SMAD6-202ENST00000557916 NUSAP1Q9BXS6 441 aaKnown RBP25.62■■□□□ 1.69
SMAD6-202ENST00000557916 CD38P28907 300 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 CSNK1EP49674 416 aaKnown RBP25.61■■□□□ 1.69
SMAD6-202ENST00000557916 SF3A2Q15428 464 aaKnown RBP25.61■■□□□ 1.69
SMAD6-202ENST00000557916 TEAD4Q15561 434 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 CYP1B1Q16678 543 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 PRUNE1Q86TP1 453 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 TAB3Q8N5C8 712 aaPredicted RBP25.61■■□□□ 1.69
SMAD6-202ENST00000557916 TMEM145Q8NBT3 493 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 ATL2Q8NHH9 583 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 C1QTNF7Q9BXJ2 289 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 CAPN10Q9HC96 672 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 CA5BQ9Y2D0 317 aa25.61■■□□□ 1.69
SMAD6-202ENST00000557916 DOCK9Q9BZ29 2069 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 A0A0U1RQS6 177 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 GOLGA6CA6NDK9 693 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 GOLGA6BA6NDN3 693 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 RAD51BO15315 384 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 ATXN1LP0C7T5 689 aaKnown RBP25.6■■□□□ 1.69
SMAD6-202ENST00000557916 GOLGA6DP0CG33 693 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 IRX4P78413 519 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 ACOX1Q15067 660 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 FAXCQ5TGI0 409 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 DENND2CQ68D51 928 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 TTC27Q6P3X3 843 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 SLC25A41Q8N5S1 370 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 GPR161Q8N6U8 529 aaKnown RBP25.6■■□□□ 1.69
SMAD6-202ENST00000557916 GLIS1Q8NBF1 620 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 LYSMD1Q96S90 227 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 KLF6Q99612 283 aaPredicted RBP25.6■■□□□ 1.69
SMAD6-202ENST00000557916 FICDQ9BVA6 458 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 GOLGA6AQ9NYA3 693 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 PLXNA2O75051 1894 aa25.6■■□□□ 1.69
SMAD6-202ENST00000557916 RECQL5O94762 991 aaPredicted RBP25.59■■□□□ 1.69
SMAD6-202ENST00000557916 AGTP01019 485 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 ZNF30P17039 623 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 COILP38432 576 aaPredicted RBP25.59■■□□□ 1.69
SMAD6-202ENST00000557916 LMNB2Q03252 620 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 AGERQ15109 404 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 SLC1A5Q15758 541 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 SIRPB2Q5JXA9 342 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 LRRC66Q68CR7 880 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 LAYNQ6UX15 382 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 ALYREFQ86V81 257 aaKnown RBP25.59■■□□□ 1.69
SMAD6-202ENST00000557916 KLHDC8BQ8IXV7 354 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 CBARPQ8N350 705 aaPredicted RBP25.59■■□□□ 1.69
SMAD6-202ENST00000557916 DENND6BQ8NEG7 585 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 CENPTQ96BT3 561 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 PAK5Q9P286 719 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 HS3ST3A1Q9Y663 406 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 RALGAPA1Q6GYQ0 2036 aa25.59■■□□□ 1.69
SMAD6-202ENST00000557916 A0A1W2PR77 199 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 GOLGA8CPA6NN73 597 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 PSMD11O00231 422 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 PHF2O75151 1096 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 CLDN7O95471 211 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 WNT1P04628 370 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 PIRTP0C851 137 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 ZSCAN5DPP0CG00 497 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 HLA-DPA1P20036 260 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 ADRA1AP35348 466 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 CHRNA4P43681 627 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 CLDN2P57739 230 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 CCDC137Q6PK04 289 aaKnown RBP25.58■■□□□ 1.69
SMAD6-202ENST00000557916 PRR23CQ6ZRP0 262 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 HSD11B1LQ7Z5J1 315 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 SKA1Q96BD8 255 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 LRRC45Q96CN5 670 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 COQ10AQ96MF6 247 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 MAGEE1Q9HCI5 957 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 FSCN3Q9NQT6 498 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 RNF14Q9UBS8 474 aa25.58■■□□□ 1.69
SMAD6-202ENST00000557916 C1orf232A0A0U1RR37 186 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 A0A1B0GVT2 93 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 FPGTO14772 594 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 VILLO15195 856 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 FOXD2O60548 495 aaPredicted RBP25.57■■□□□ 1.68
SMAD6-202ENST00000557916 GM2AP17900 193 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 RPL22P35268 128 aaKnown RBP25.57■■□□□ 1.68
SMAD6-202ENST00000557916 FDFT1P37268 417 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 PAFAH1B1P43034 410 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 PTSQ03393 145 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 OLIG2Q13516 323 aa25.57■■□□□ 1.68
SMAD6-202ENST00000557916 SPARCL1Q14515 664 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms