RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TRIM61Q5EBN2 209 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 ARMC3Q5W041 872 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 KDELC1Q6UW63 502 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 ZNF765Q7L2R6 523 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 ARMCX6Q7L4S7 300 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 ABI3BPQ7Z7G0 1075 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 ZSWIM9Q86XI8 627 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 C1orf54Q8WWF1 131 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 CENPTQ96BT3 561 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 PHOX2BQ99453 314 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 TUBB2BQ9BVA1 445 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 MIR1-1HGQ9H1L0 117 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 TMEM74BQ9NUR3 256 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 B4GALT6Q9UBX8 382 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 TTC24A2A3L6 582 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 CCDC188H7C350 402 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 ARHGAP33O14559 1287 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 YKT6O15498 198 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 LZTS3O60299 673 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 MMP20O60882 483 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 GJB3O75712 270 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 PAK4O96013 591 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 MT-CYBP00156 380 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 HOXC4P09017 264 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 ZNF883P0CG24 379 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 C6P13671 934 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 CASQ1P31415 396 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 HNF1BP35680 557 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 LIMK1P53667 647 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 C21orf59P57076 290 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 DPTQ07507 201 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 QPCTQ16769 361 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 RANBP10Q6VN20 620 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 KYAT3Q6YP21 454 aaKnown RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 PRR23CQ6ZRP0 262 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 ADAT2Q7Z6V5 191 aaKnown RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 DEFB119Q8N690 84 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 SPATA22Q8NHS9 363 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 CCDC110Q8TBZ0 833 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 COG1Q8WTW3 980 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 ATG4AQ8WYN0 398 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 MAGOHBQ96A72 148 aaKnown RBP13.72□□□□□ -0.21
SHMT2-234ENST00000557703 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 CEP41Q9BYV8 373 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 USP34Q70CQ2 3546 aa13.72□□□□□ -0.21
SHMT2-234ENST00000557703 A0A1W2PR77 199 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 A6NNZ2 444 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 TLR4O00206 839 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 WNT9AO14904 365 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 SLC31A1O15431 190 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 PMPCBO75439 489 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 CER1O95813 267 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 GAS8O95995 478 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 IFNB1P01574 187 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 CFIP05156 583 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 MAOBP27338 520 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 PSMB4P28070 264 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 MAT2AP31153 395 aaKnown RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 HMGCLP35914 325 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 ATXN3P54252 364 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 SPEM2Q0P670 501 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 RALGDSQ12967 914 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 SLC14A1Q13336 389 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 MTM1Q13496 603 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 LAMB3Q13751 1172 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 IHHQ14623 411 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 SEL1L3Q68CR1 1132 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 KCTD11Q693B1 232 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 CRTC1Q6UUV9 634 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 SYDE1Q6ZW31 735 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 B4GALNT4Q76KP1 1039 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 ZCCHC9Q8N567 271 aaKnown RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 LPCAT1Q8NF37 534 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 SLCO2A1Q92959 643 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 KLHDC7BQ96G42 594 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 COQ10AQ96MF6 247 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 KLF6Q99612 283 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 EBF2Q9HAK2 575 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 ZFYVE1Q9HBF4 777 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 PKD2L2Q9NZM6 624 aa13.71□□□□□ -0.21
SHMT2-234ENST00000557703 NFKBIL1Q9UBC1 381 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-234ENST00000557703 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 NPIPB15A6NHN6 443 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 PHF2O75151 1096 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 RECQL5O94762 991 aaPredicted RBP13.7□□□□□ -0.22
SHMT2-234ENST00000557703 AP2A1O95782 977 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 KELP23276 732 aa13.7□□□□□ -0.22
SHMT2-234ENST00000557703 ADRA1AP35348 466 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms