RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 UBFD1O14562 309 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ANGPT2O15123 496 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 TPST1O60507 370 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 PMPCBO75439 489 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 MYL3P08590 195 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ALDOCP09972 364 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 FCGR1AP12314 374 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 UGT1A6P19224 532 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 DCKP27707 260 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 CD97P48960 835 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC44A4Q53GD3 710 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 TMTC4Q5T4D3 741 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 COLGALT2Q8IYK4 626 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 MINDY1Q8N5J2 469 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 EDEM1Q92611 657 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 DOK1Q99704 481 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 SMOQ99835 787 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 RPF2Q9H7B2 306 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 GID8Q9NWU2 228 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ACTR3BQ9P1U1 418 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 H3BMQ9 156 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 GPR32O75388 356 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ATE1O95260 518 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 RASAL1O95294 804 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 FAM163BP0C2L3 166 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 AXLP30530 894 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC14A2Q15849 920 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 XKR4Q5GH76 650 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF678Q5SXM1 525 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 CYHR1Q6ZMK1 362 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 GPRIN1Q7Z2K8 1008 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 SPRED1Q7Z699 444 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 FAM35AQ86V20 835 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC15A3Q8IY34 581 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 CLYBLQ8N0X4 340 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 MIER2Q8N344 545 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ZBTB8BQ8NAP8 495 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 L3HYPDHQ96EM0 354 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 UBXN10Q96LJ8 280 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 COG8Q96MW5 612 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 EGFL7Q9UHF1 273 aa11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-211ENST00000557658 DYTNA2CJ06 578 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 GABRDO14764 452 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 MATN3O15232 486 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 GPIP06744 558 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CHRNA4P43681 627 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 LEPRP48357 1165 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CCT8P50990 548 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 NAA20P61599 178 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CBX3Q13185 183 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 PMS2P3Q13401 168 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 RAB39AQ14964 217 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF789Q5FWF6 425 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 RAB41Q5JT25 222 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 HECTD2Q5U5R9 776 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 GPR107Q5VW38 600 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 DHRSXQ8N5I4 330 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 TRPV3Q8NET8 790 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 C3orf30Q96M34 536 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CRTAC1Q9NQ79 661 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 OAZ3Q9UMX2 235 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 FADS3Q9Y5Q0 445 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 OTOFQ9HC10 1997 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 RRN3P2A6NIE6 340 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 SNAP91O60641 907 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 TSPAN8P19075 237 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CAPGP40121 348 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ADCYAP1R1P41586 468 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 SPATS1Q496A3 300 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 VPS26BQ4G0F5 336 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 KIAA0319Q5VV43 1072 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 KDELC2Q7Z4H8 507 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ARHGAP12Q8IWW6 846 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ADGRG5Q8IZF4 528 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ANKRD49Q8WVL7 239 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 FBXL20Q96IG2 436 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ATXN3LQ9H3M9 355 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 ALG9Q9H6U8 611 aa11.84□□□□□ -0.51
VIPAS39-211ENST00000557658 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms