RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PREBQ9HCU5 417 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TPX2Q9ULW0 747 aaKnown RBP15.32■□□□□ 0.04
NEDD1-213ENST00000557644 BPTFQ12830 3046 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 DNAH14Q0VDD8 3507 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 C1orf232A0A0U1RR37 186 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TP73O15350 636 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LILRB5O75023 590 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 FSBPO95073 299 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 CLDN7O95471 211 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TPSB2P20231 275 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 VIPR1P32241 457 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 FGL2Q14314 439 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TPSAB1Q15661 275 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 TMEM52BQ4KMG9 183 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LIPIQ6XZB0 460 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 PPP1R21Q6ZMI0 780 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 ARMCX6Q7L4S7 300 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LYSMD3Q7Z3D4 306 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 SLC41A1Q8IVJ1 513 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 NDUFAF2Q8N183 169 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 DNAAF3Q8N9W5 541 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 BIRC7Q96CA5 298 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LYSMD1Q96S90 227 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 KDM4CQ9H3R0 1056 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 EBF2Q9HAK2 575 aa15.32■□□□□ 0.04
NEDD1-213ENST00000557644 LAMA1P25391 3075 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 C10orf142B7Z368 130 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 AVILO75366 819 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 HEXIM1O94992 359 aaKnown RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 IGHV4-34P06331 123 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 ELFN1P0C7U0 828 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 PTGER3P43115 390 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 PTSQ03393 145 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 DUPD1Q68J44 220 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 SLC36A4Q6YBV0 504 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 RFLNAQ6ZTI6 216 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 PPIL6Q8IXY8 311 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 CXorf40AQ8TE69 158 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 MAGEE1Q9HCI5 957 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 CASS4Q9NQ75 786 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 ESYT3A0FGR9 886 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 SEC31AO94979 1220 aaKnown RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 CYP2A6P11509 494 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 C6P13671 934 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 GM2AP17900 193 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 LPAL2Q16609 132 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 ZNF284Q2VY69 593 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 PLK5Q496M5 336 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 CERCAMQ5T4B2 595 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 KIAA0895LQ68EN5 471 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 CEP68Q76N32 757 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 HSD11B1LQ7Z5J1 315 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 LINC00523Q86TU6 105 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 HORMAD1Q86X24 394 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 SNF8Q96H20 258 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 HSPA12BQ96MM6 686 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 DUSP15Q9H1R2 295 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 UTP11Q9Y3A2 253 aaKnown RBP15.31■□□□□ 0.04
NEDD1-213ENST00000557644 ZNF711Q9Y462 761 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 SLCO1B1Q9Y6L6 691 aa15.31■□□□□ 0.04
NEDD1-213ENST00000557644 DOCK9Q9BZ29 2069 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 PLXND1Q9Y4D7 1925 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
NEDD1-213ENST00000557644 PAK4O96013 591 aaPredicted RBP15.3■□□□□ 0.04
NEDD1-213ENST00000557644 MAOBP27338 520 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 ITGA8P53708 1063 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 RPS21P63220 83 aaKnown RBP15.3■□□□□ 0.04
NEDD1-213ENST00000557644 CDH17Q12864 832 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 ARHGEF7Q14155 803 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 POU6F1Q14863 301 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 SNX19Q92543 992 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 ARL5AQ9Y689 179 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 TRPM6Q9BX84 2022 aa15.3■□□□□ 0.04
NEDD1-213ENST00000557644 METTL12A8MUP2 240 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 SLC31A1O15431 190 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 C1SP09871 688 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 NFKBIAP25963 317 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 CNR2P34972 360 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 SESN2P58004 480 aaPredicted RBP15.29■□□□□ 0.04
NEDD1-213ENST00000557644 CRADDP78560 199 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 CDK16Q00536 496 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 SIM2Q14190 667 aaPredicted RBP15.29■□□□□ 0.04
NEDD1-213ENST00000557644 PTPRCAPQ14761 206 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 PMS2CLQ68D20 193 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 NEK5Q6P3R8 708 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 PRR23BQ6ZRT6 265 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 LPCAT2Q7L5N7 544 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 CAND1Q86VP6 1230 aaKnown RBP15.29■□□□□ 0.04
NEDD1-213ENST00000557644 TRIM69Q86WT6 500 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 CADM4Q8NFZ8 388 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 PWWP2AQ96N64 755 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 ZFYVE1Q9HBF4 777 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 FZD3Q9NPG1 666 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 RRAGDQ9NQL2 400 aaPredicted RBP15.29■□□□□ 0.04
NEDD1-213ENST00000557644 GPR179Q6PRD1 2367 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 ETV3P41162 512 aa15.29■□□□□ 0.04
NEDD1-213ENST00000557644 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms