RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PPP6R3Q5H9R7 873 aaPredicted RBP14.84□□□□□ -0.03
CHD8-211ENST00000556833 SPECC1LQ69YQ0 1117 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 BRAT1Q6PJG6 821 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 LVRNQ6Q4G3 990 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 LIPIQ6XZB0 460 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 SPRED1Q7Z699 444 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 NPWQ8N729 165 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 ATL2Q8NHH9 583 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
CHD8-211ENST00000556833 USP7Q93009 1102 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 TMEM74Q96NL1 305 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 ARHGAP9Q9BRR9 750 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 SNRNP25Q9BV90 132 aaKnown RBP14.84□□□□□ -0.03
CHD8-211ENST00000556833 TRIM7Q9C029 511 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 LRIT1Q9P2V4 623 aa14.84□□□□□ -0.03
CHD8-211ENST00000556833 HEMK1Q9Y5R4 338 aaPredicted RBP14.84□□□□□ -0.03
CHD8-211ENST00000556833 MAST4O15021 2626 aa14.83□□□□□ -0.03
CHD8-211ENST00000556833 TLN1Q9Y490 2541 aaKnown RBP14.83□□□□□ -0.04
CHD8-211ENST00000556833 ARHGAP42A6NI28 874 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 WT1P19544 449 aaPredicted RBP14.83□□□□□ -0.04
CHD8-211ENST00000556833 CCKBRP32239 447 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 OR1D5P58170 312 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 KIAA1024LP59773 190 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 BCL2L1Q07817 233 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 PTPRRQ15256 657 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 C14orf28Q4W4Y0 310 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 MANEAQ5SRI9 462 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 PPP1R15BQ5SWA1 713 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 CERCAMQ5T4B2 595 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 ARHGAP12Q8IWW6 846 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 MCOLN2Q8IZK6 566 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 RCBTB1Q8NDN9 531 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 PTCD2Q8WV60 388 aaKnown RBP14.83□□□□□ -0.04
CHD8-211ENST00000556833 PATE1Q8WXA2 126 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 SGF29Q96ES7 293 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 ZNF641Q96N77 438 aaPredicted RBP14.83□□□□□ -0.04
CHD8-211ENST00000556833 FAM117AQ9C073 453 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 CLMPQ9H6B4 373 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 WDR26Q9H7D7 661 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 CARS2Q9HA77 564 aaKnown RBP14.83□□□□□ -0.04
CHD8-211ENST00000556833 ZFC3H1O60293 1989 aaKnown RBP14.83□□□□□ -0.04
CHD8-211ENST00000556833 SPTA1P02549 2419 aa14.83□□□□□ -0.04
CHD8-211ENST00000556833 A0A0U1RQS6 177 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 PRSS38A1L453 326 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 LGALS16A8MUM7 142 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 GLB1P16278 677 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 ERCC2P18074 760 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 AK4P27144 223 aaPredicted RBP14.82□□□□□ -0.04
CHD8-211ENST00000556833 ALDH4A1P30038 563 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 MLLT3P42568 568 aaPredicted RBP14.82□□□□□ -0.04
CHD8-211ENST00000556833 SUOXP51687 545 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 NDST2P52849 883 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 EIF3IQ13347 325 aaKnown RBP14.82□□□□□ -0.04
CHD8-211ENST00000556833 GRM3Q14832 879 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 C16orf72Q14CZ0 275 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 ACAD10Q6JQN1 1059 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 DOK6Q6PKX4 331 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 DPPA4Q7L190 304 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 PMEPA1Q969W9 287 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 NUDT22Q9BRQ3 303 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 SPATS2LQ9NUQ6 558 aaKnown RBP14.82□□□□□ -0.04
CHD8-211ENST00000556833 B4GALT6Q9UBX8 382 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 PCDHGA7Q9Y5G6 932 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 DGKBQ9Y6T7 804 aa14.82□□□□□ -0.04
CHD8-211ENST00000556833 C9orf172C9J069 976 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 TMX2-CTNND1H3BSU7 103 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 LIPCP11150 499 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 CCL4P13236 92 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 MPSTP25325 297 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 GNPDA1P46926 289 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 PPM1FP49593 454 aaPredicted RBP14.81□□□□□ -0.04
CHD8-211ENST00000556833 KCNC4Q03721 635 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 HLTFQ14527 1009 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD8-211ENST00000556833 SLC30A9Q6PML9 568 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 RFX8Q6ZV50 586 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 HEATR4Q86WZ0 1026 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 ARFGAP1Q8N6T3 406 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 HCAR2Q8TDS4 363 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 NUS1Q96E22 293 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 PCDHGC4Q9Y5F7 938 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 PCDHGA4Q9Y5G9 962 aa14.81□□□□□ -0.04
CHD8-211ENST00000556833 NAV2Q8IVL1 2488 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 RHPN2P1A8MT19 583 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 DESP17661 470 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
CHD8-211ENST00000556833 TNFAIP3P21580 790 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 POLD2P49005 469 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 AIF1P55008 147 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 MAXP61244 160 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 ZFP36L1Q07352 338 aaKnown RBP14.8□□□□□ -0.04
CHD8-211ENST00000556833 SLC10A7Q0GE19 358 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 BIRC2Q13490 618 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 MAMLD1Q13495 774 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 AGERQ15109 404 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 CNGA3Q16281 694 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 ERMARDQ5T6L9 678 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 NKAIN2Q5VXU1 208 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 PNCKQ6P2M8 343 aa14.8□□□□□ -0.04
CHD8-211ENST00000556833 SLITRK4Q8IW52 837 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms