RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 GTF2H1P32780 548 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 HOXD13P35453 343 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 PAFAH1B1P43034 410 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 MAGEA1P43355 309 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 QARSP47897 775 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 KLK7P49862 253 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 CASP5P51878 434 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 CACNB3P54284 484 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 WNT3P56703 355 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 POLR2FP61218 127 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 RAB1AP62820 205 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 TNNC1P63316 161 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 CBX1P83916 185 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 GTF2BQ00403 316 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 KLHL30Q0D2K2 578 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 CETN1Q12798 172 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 IKQ13123 557 aaPredicted RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 SMC1AQ14683 1233 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 CASP8Q14790 479 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 RBMS2Q15434 407 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 TWIST1Q15672 202 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 USH1GQ495M9 461 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 PLA1AQ53H76 456 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 TDRD12Q587J7 1177 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 HSP90B2PQ58FF3 399 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 AWAT1Q58HT5 328 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 LMBRD2Q68DH5 695 aaPredicted RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 ZNF813Q6ZN06 617 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 C9orf47Q6ZRZ4 202 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 RRAGAQ7L523 313 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 ENOSF1Q7L5Y1 443 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 ZNF720Q7Z2F6 126 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 APOBEC3FQ8IUX4 373 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 ADHFE1Q8IWW8 467 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 EFCAB13Q8IY85 973 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 FAM186BQ8IYM0 893 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 SCYL3Q8IZE3 742 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 RASGEF1CQ8N431 466 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 LRRC57Q8N9N7 239 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 NOA1Q8NC60 698 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 SPATA4Q8NEY3 305 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 BPIFB1Q8TDL5 484 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 PIGOQ8TEQ8 1089 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 AENQ8WTP8 325 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 RFFLQ8WZ73 363 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 NT5C1BQ96P26 610 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 SPAG5Q96R06 1193 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 NAP1L3Q99457 506 aaPredicted RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 PLIN2Q99541 437 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 SH3GL2Q99962 352 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 NTPCRQ9BSD7 190 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 ZNF577Q9BSK1 485 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 STK33Q9BYT3 514 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 MS4A7Q9GZW8 240 aaPredicted RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 CARD9Q9H257 536 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 UNC45AQ9H3U1 944 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 AGO4Q9HCK5 861 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 MYOZ2Q9NPC6 264 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 SIX2Q9NPC8 291 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 GDF3Q9NR23 364 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 AGPAT3Q9NRZ7 376 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 GCNT4Q9P109 453 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 TCEAL9Q9UHQ7 104 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 LCMT1Q9UIC8 334 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 ERRFI1Q9UJM3 462 aaPredicted RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 COQ4Q9Y3A0 265 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 ZDBF2Q9HCK1 2354 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 ATXN2Q99700 1313 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 ZNF541Q9H0D2 1346 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 IGSF9BQ9UPX0 1349 aa3.34□□□□□ -1.87
RDH11-208ENST00000556692 PDCD11Q14690 1871 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 ASH1LQ9NR48 2969 aaKnown RBP3.34□□□□□ -1.87
RDH11-208ENST00000556692 ASPMQ8IZT6 3477 aa3.34□□□□□ -1.88
RDH11-208ENST00000556692 MYO15AQ9UKN7 3530 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 PLXNB2O15031 1838 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 FLNBO75369 2602 aaKnown RBP3.33□□□□□ -1.88
RDH11-208ENST00000556692 TRPM7Q96QT4 1865 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 A0A087WWL8 130 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 A0A087X0T9 212 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 A0A088AWK7 358 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 MACROD2A1Z1Q3 448 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 ARHGEF35A5YM69 484 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 MIF4GDA9UHW6 222 aaKnown RBP3.33□□□□□ -1.88
RDH11-208ENST00000556692 TCP10L2B9ZVM9 353 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 C19orf81C9J6K1 198 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 GOLGA8KD6RF30 607 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 PGRMC1O00264 195 aaKnown RBP3.33□□□□□ -1.88
RDH11-208ENST00000556692 SHOX2O60902 331 aaPredicted RBP3.33□□□□□ -1.88
RDH11-208ENST00000556692 PMPCBO75439 489 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 GGPS1O95749 300 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 PIGRP01833 764 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 IVLP07476 585 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 PLEKP08567 350 aaPredicted RBP3.33□□□□□ -1.88
RDH11-208ENST00000556692 FAM228BP0C875 321 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 MYBP10242 640 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 KITP10721 976 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 GZMAP12544 262 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 PRF1P14222 555 aa3.33□□□□□ -1.88
RDH11-208ENST00000556692 HTR1BP28222 390 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms