RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RHOP08100 348 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 CCR10P46092 362 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 CDKN2DP55273 166 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 ABCE1P61221 599 aaKnown RBP18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 KCNJ2P63252 427 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 MPPE1Q53F39 396 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 INO80DQ53TQ3 878 aaPredicted RBP18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 CLNKQ7Z7G1 428 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 PIM3Q86V86 326 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 DCAF4L2Q8NA75 395 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 OR4L1Q8NH43 312 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 GPR78Q96P69 363 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 TNKS2Q9H2K2 1166 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 SLC40A1Q9NP59 571 aa18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 ARIH1Q9Y4X5 557 aaPredicted RBP18.36■□□□□ 0.53
SDR39U1-220ENST00000556548 ANKRD66B4E2M5 251 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 MOSPD3O75425 235 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 CTPS1P17812 591 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 CLCN5P51795 746 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ACVR1Q04771 509 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 DBN1Q16643 649 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 CAMK1DQ8IU85 385 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 PPP4R1Q8TF05 950 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 MIEF2Q96C03 454 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 KLHL29Q96CT2 875 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 C2orf49Q9BVC5 232 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ADGRE3Q9BY15 652 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 MCOLN1Q9GZU1 580 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 CATSPERZQ9NTU4 200 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 EVLQ9UI08 416 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ZNF510Q9Y2H8 683 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 VWA7Q9Y334 891 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 HCFC2Q9Y5Z7 792 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 KLHL2O95198 593 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 GRK2P25098 689 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 CTSOP43234 321 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 POLD2P49005 469 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 CDKN1CP49918 316 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ZNF140P52738 457 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 TMEM25Q86YD3 366 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 PIWIL2Q8TC59 973 aaKnown RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 RILPQ96NA2 401 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 FAM96AQ9H5X1 160 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 GPAMQ9HCL2 828 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ABCB8Q9NUT2 735 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 OXSMQ9NWU1 459 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 KCNK4Q9NYG8 393 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ARMCX1Q9P291 453 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 INTS6Q9UL03 887 aaKnown RBP18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
SDR39U1-220ENST00000556548 C2orf81A6NN90 581 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 BNIP3LO60238 219 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 TRIM13O60858 407 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 UNC5CO95185 931 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 PIGNO95427 931 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 PRAMEF12O95522 483 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 CCDC166P0CW27 439 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 T-ENOLP0DO92 83 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 PTPN2P17706 415 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 CES1P23141 567 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 SP100P23497 879 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 PMLP29590 882 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 EPHB1P54762 984 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 LAMB3Q13751 1172 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 MRNIPQ6NTE8 343 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 CPXM2Q8N436 756 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 PAF1Q8N7H5 531 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 ANKRD49Q8WVL7 239 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 ING5Q8WYH8 240 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 USP13Q92995 863 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 SKA1Q96BD8 255 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 GATA5Q9BWX5 397 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 SHCBP1LQ9BZQ2 653 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 TLE6Q9H808 572 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 NLE1Q9NVX2 485 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 ARHGAP26Q9UNA1 814 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 HSPA4LO95757 839 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 STK19P49842 368 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 NSUN2Q08J23 767 aaKnown RBP eCLIP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 USP4Q13107 963 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 CBX2Q14781 532 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 TAF1AQ15573 450 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 SLC14A2Q15849 920 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 ARMC3Q5W041 872 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 RETSATQ6NUM9 610 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 ZYG11AQ6WRX3 759 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 GRASPQ7Z6J2 395 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 RYBPQ8N488 228 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 TTC8Q8TAM2 541 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 NMUR2Q9GZQ4 415 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 IGSF5Q9NSI5 407 aa18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 KIAA1522Q9P206 1035 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-220ENST00000556548 A0A087X1B8 175 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 ALPIP09923 528 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 COL6A2P12110 1019 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 VWA5B1Q5TIE3 1220 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 ZNF549Q6P9A3 640 aa18.33■□□□□ 0.53
SDR39U1-220ENST00000556548 TMEM207Q6UWW9 146 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms