RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 COX4I2Q96KJ9 171 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 KLF6Q99612 283 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 MIPEPQ99797 713 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 LRRC61Q9BV99 259 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 SLC13A1Q9BZW2 595 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 CARS2Q9HA77 564 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 SLC39A2Q9NP94 309 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 CISHQ9NSE2 258 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 XPO7Q9UIA9 1087 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 SLC25A13Q9UJS0 675 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 TSPAN16Q9UKR8 245 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 PNMA8BQ9ULN7 279 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 VPS4AQ9UN37 437 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 NAALADL1Q9UQQ1 740 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 TLR6Q9Y2C9 796 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 NAV3Q8IVL0 2385 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 HIVEP3Q5T1R4 2406 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 RNF103O00237 685 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 SPTLC2O15270 562 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 NKX2-8O15522 239 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 DDAH2O95865 285 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 MOCS2O96007 188 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 MT-CO1P00395 513 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 LTFP02788 710 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 FYNP06241 537 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 LIFP15018 202 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 GNLYP22749 145 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 ANP32AP39687 249 aaKnown RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 GDNFP39905 211 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 RECQLP46063 649 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 GCLMP48507 274 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 VAMP7P51809 220 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 SGCGQ13326 291 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 PTK2BQ14289 1009 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 NKG7Q16617 165 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 FAXCQ5TGI0 409 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 RAP1GAP2Q684P5 730 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CXorf57Q6NSI4 855 aaKnown RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 THAP5Q7Z6K1 395 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 SLITRK4Q8IW52 837 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 SRRM1Q8IYB3 904 aaKnown RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CCAR2Q8N163 923 aaKnown RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 Q8N9G6 341 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 TEX19Q8NA77 164 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 KYQ8NBH2 561 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC150Q8NCX0 1101 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 OR2A12Q8NGT7 310 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 UBA3Q8TBC4 463 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 APOBEC4Q8WW27 367 aaKnown RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 ASB12Q8WXK4 309 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 RNF34Q969K3 372 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC120Q96HB5 630 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 SERPINB11Q96P15 392 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 FEM1AQ9BSK4 669 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CUEDC2Q9H467 287 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 ATP13A1Q9HD20 1204 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 SIRPGQ9P1W8 387 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 HESX1Q9UBX0 185 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 APPL1Q9UKG1 709 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 FRMD4BQ9Y2L6 1034 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 OR51B4Q9Y5P0 310 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 FADS3Q9Y5Q0 445 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 CAPN6Q9Y6Q1 641 aa6.96□□□□□ -1.3
ATXN3-236ENST00000556220 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-236ENST00000556220 PCNX1Q96RV3 2341 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 IGLON5A6NGN9 336 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 F5H5T6 163 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 M0QYT0 321 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 AP1G1O43747 822 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CNTN5O94779 1100 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 NR3C1P04150 777 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PRKCGP05129 697 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 GLI1P08151 1106 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 ALPIP09923 528 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 SETSIPP0DME0 302 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CCL4P13236 92 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PNLIPP16233 465 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 UGT1A3P35503 534 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 BLKP51451 505 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 NEK3P51956 506 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PPARDQ03181 441 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PPP3CAQ08209 521 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 ELOCQ15369 112 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 MLANAQ16655 118 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 WIPI1Q5MNZ9 446 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CDKAL1Q5VV42 579 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PMF1Q6P1K2 205 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 LETMD1Q6P1Q0 360 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 MAMDC2Q7Z304 686 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-236ENST00000556220 TMPRSS9Q7Z410 1059 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 HEATR4Q86WZ0 1026 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CHSY1Q86X52 802 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CIR1Q86X95 450 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-236ENST00000556220 FSTL5Q8N475 847 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-236ENST00000556220 DENND6BQ8NEG7 585 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PCDH19Q8TAB3 1148 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 DQX1Q8TE96 717 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms