RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SLC22A17Q8WUG5 538 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CENPTQ96BT3 561 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 SLC39A13Q96H72 371 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF512Q96ME7 567 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TSGA13Q96PP4 275 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 KLHL5Q96PQ7 755 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CYTH2Q99418 400 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TM9SF2Q99805 663 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 SELENOSQ9BQE4 189 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CLSTN3Q9BQT9 956 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 NAT9Q9BTE0 207 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 NACA2Q9H009 215 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ACSS3Q9H6R3 686 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CYP4F11Q9HBI6 524 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■□□□ 12.6
SLIRP-204ENST00000555890 OSER1Q9NX31 292 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TRPM5Q9NZQ8 1165 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 SENP1Q9P0U3 644 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 PPARGC1AQ9UBK2 798 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ZC3H7BQ9UGR2 993 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ZMYM5Q9UJ78 669 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 HCN2Q9UL51 889 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CHMP2BQ9UQN3 213 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 HBS1LQ9Y450 684 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 PCDHB12Q9Y5F1 795 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 SNX10Q9Y5X0 201 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 HS3ST4Q9Y661 456 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TEX264Q9Y6I9 313 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 BOD1L1Q8NFC6 3051 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 DOCK6Q96HP0 2047 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 SDR42E2A6NKP2 422 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 WASH4PA8MWX3 477 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 E9PAM4 449 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 DFFAO00273 331 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 MAN1A2O60476 641 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 TLR5O60602 858 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 NEBLO76041 1014 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 ZDHHC11BP0C7U3 371 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 RPL17P18621 184 aaKnown RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 KRT15P19012 456 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 PTPN3P26045 913 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 SSTR1P30872 391 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 LSP1P33241 339 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 PGFP49763 221 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 NDST2P52849 883 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 EPHB3P54753 998 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 GPX6P59796 221 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 GUCY1A3Q02108 690 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 DMTNQ08495 405 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 PLD1Q13393 1074 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 FASTKD3Q14CZ7 662 aaKnown RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 TMED2Q15363 201 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 ANO4Q32M45 955 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 TEX44Q53QW1 395 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 HECTD3Q5T447 861 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 SYCP2LQ5T4T6 812 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 MANEALQ5VSG8 457 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 LRRC8BQ6P9F7 803 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 C6orf15Q6UXA7 325 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 SPATC1Q76KD6 591 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 EXOC3L1Q86VI1 746 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 CAND1Q86VP6 1230 aaKnown RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 MIB1Q86YT6 1006 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 SLC44A3Q8N4M1 653 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 RTL3Q8N8U3 475 aaKnown RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 STK35Q8TDR2 534 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 NSMCE1Q8WV22 266 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 TCF25Q9BQ70 676 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 FOXQ1Q9C009 403 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 ZYG11BQ9C0D3 744 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 RETREG1Q9H6L5 497 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 KCNK9Q9NPC2 374 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 MRPL17Q9NRX2 175 aaKnown RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 INTS9Q9NV88 658 aaKnown RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 NKIRAS1Q9NYS0 192 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 PSMC3IPQ9P2W1 217 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 TBK1Q9UHD2 729 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 RSPH14Q9UHP6 348 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 PFDN2Q9UHV9 154 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 SOX13Q9UN79 622 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 POLR3KQ9Y2Y1 108 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 HEMK1Q9Y5R4 338 aaPredicted RBP6.91□□□□□ -1.3
SLIRP-204ENST00000555890 MAD1L1Q9Y6D9 718 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 CLUHO75153 1309 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 RALGAPA1Q6GYQ0 2036 aa6.91□□□□□ -1.3
SLIRP-204ENST00000555890 CELSR1Q9NYQ6 3014 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MIA3Q5JRA6 1907 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 IQANK1A0A1B0GTG1 560 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MAGEB16A2A368 324 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 GMNCA6NCL1 334 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ARHGAP42A6NI28 874 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 DRGXA6NNA5 263 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 RASA4BC9J798 803 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 KCNK1O00180 336 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms