RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 ECT2LQ008S8 904 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 LGALS3BPQ08380 585 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 PMS2P3Q13401 168 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 FRG1Q14331 258 aaKnown RBP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 CYP27C1Q4G0S4 372 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 IQCCQ4KMZ1 466 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 C16orf46Q6P387 395 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 PDCD6IPQ8WUM4 868 aaKnown RBP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 LENG8Q96PV6 779 aaPredicted RBP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 RTKNQ9BST9 563 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 TRIM62Q9BVG3 475 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 TRIM39Q9HCM9 518 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 DUSP12Q9UNI6 340 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 ST14Q9Y5Y6 855 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 OR6C74A6NCV1 312 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 HMX3A6NHT5 357 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 CXorf49A8MYA2 514 aaPredicted RBP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 H0Y626 953 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 SLC22A1O15245 554 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 TREHO43280 583 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 AVILO75366 819 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 ERBB2P04626 1255 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 RPL22P35268 128 aaKnown RBP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 SERPINB5P36952 375 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 GRM5P41594 1212 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 NPTX2P47972 431 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 RGS7P49802 495 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 STX1BP61266 288 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 COTL1Q14019 142 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 OXA1LQ15070 435 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 TEDDM1Q5T9Z0 273 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 ABRAXAS1Q6UWZ7 409 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 STXBP4Q6ZWJ1 553 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 GALNT5Q7Z7M9 940 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 RNF135Q8IUD6 432 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 ZC3H7AQ8IWR0 971 aaKnown RBP10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 SULF1Q8IWU6 871 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 TPH2Q8IWU9 490 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 RCOR2Q8IZ40 523 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 OR5H6Q8NGV6 325 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 POC1BQ8TC44 478 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 RAD51AP1Q96B01 352 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 CBWD1Q9BRT8 395 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 EMILIN2Q9BXX0 1053 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 ANKMY1Q9P2S6 941 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 SH3BGRL2Q9UJC5 107 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 CPQQ9Y646 472 aa10.39□□□□□ -0.75
EFCAB11-208ENST00000555872 A0A0G2JPF8 293 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 A0A1W2PQ72 361 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 HNRNPCL3B7ZW38 293 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 OR7A10O76100 309 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 HNRNPCL4P0DMR1 293 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 NRLP54845 237 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 RNF4P78317 190 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 KLF10Q13118 480 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 AOC3Q16853 763 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 MROH9Q5TGP6 573 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ANGEL2Q5VTE6 544 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PM20D1Q6GTS8 502 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 MACC1Q6ZN28 852 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 C1orf186Q6ZWK4 172 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 CLEC10AQ8IUN9 316 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 FAM156AQ8NDB6 213 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 VANGL1Q8TAA9 524 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 NKD2Q969F2 451 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ZDHHC15Q96MV8 337 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PPP1R2P1Q96PQ5 205 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 BRINP2Q9C0B6 783 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ZCCHC2Q9C0B9 1178 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 STN1Q9H668 368 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 RIC8BQ9NVN3 520 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 SPATA6Q9NWH7 488 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 MBD1Q9UIS9 605 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 CNOT11Q9UKZ1 510 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ANKRD6Q9Y2G4 727 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 MED16Q9Y2X0 877 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 DBX1A6NMT0 343 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 C16orf96A6NNT2 1141 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PDPK1O15530 556 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 CAPNS1P04632 268 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PSMC5P62195 406 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 RAB39AQ14964 217 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 MINDY4Q4G0A6 757 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 KRBOX4Q5JUW0 171 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 PPM1LQ5SGD2 360 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 LDLRAP1Q5SW96 308 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 TTC33Q6PID6 262 aaPredicted RBP10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 SUSD1Q6UWL2 747 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 SPOCD1Q6ZMY3 1216 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ATG14Q6ZNE5 492 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 ARCQ7LC44 396 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 BTLAQ7Z6A9 289 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 C12orf56Q8IXR9 622 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 DSELQ8IZU8 1212 aa10.38□□□□□ -0.75
EFCAB11-208ENST00000555872 EID3Q8N140 333 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms