RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 RDH14Q9HBH5 336 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 FGF22Q9HCT0 170 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 COX16Q9P0S2 106 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 HECAQ9UBI9 543 aaPredicted RBP9.17□□□□□ -0.94
PRKCH-218ENST00000555628 PILRAQ9UKJ1 303 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 DAAM1Q9Y4D1 1078 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 B3GALT1Q9Y5Z6 326 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 ESPL1Q14674 2120 aa9.17□□□□□ -0.94
PRKCH-218ENST00000555628 HIVEP1P15822 2718 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ZNF891A8MT65 544 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 BECN2A8MW95 431 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 SEMA7AO75326 666 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 GRAP2O75791 330 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 TM7SF2O76062 418 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 CPNE6O95741 557 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 GSRP00390 522 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 F13A1P00488 732 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ERBB2P04626 1255 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 UGT2B4P06133 528 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ZSCAN22P10073 491 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 NR1D1P20393 614 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 OR1E1P30953 314 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 CSF2RBP32927 897 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ACVRL1P37023 503 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 PRCPP42785 496 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 FKBP3Q00688 224 aaKnown RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 NME3Q13232 169 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 SQSTM1Q13501 440 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 PKP1Q13835 747 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 CLPPQ16740 277 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 KLHL40Q2TBA0 621 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 TMEM52BQ4KMG9 183 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 LACTB2Q53H82 288 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 BRMS1LQ5PSV4 323 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 PHF19Q5T6S3 580 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ANKRD40Q6AI12 368 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 RETSATQ6NUM9 610 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 GKN2Q86XP6 184 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 RCBTB1Q8NDN9 531 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ZNF606Q8WXB4 792 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ARHGEF26Q96DR7 871 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 C1orf74Q96LT6 269 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 TAAR9Q96RI9 348 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 TKTL2Q9H0I9 626 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 UPF2Q9HAU5 1272 aaKnown RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 LRIT1Q9P2V4 623 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 ARMCX3Q9UH62 379 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
PRKCH-218ENST00000555628 OR1A2Q9Y585 309 aa9.16□□□□□ -0.94
PRKCH-218ENST00000555628 MTORP42345 2549 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 TMEM202A6NGA9 273 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 TMEM110-MUSTN1A8MSY1 372 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 RAD1O60671 282 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 PRKCGP05129 697 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 KRT7P08729 469 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 THRAP10827 490 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 BMP6P22004 513 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 CD1CP29017 333 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 LIMK2P53671 638 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 MLLT10P55197 1068 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 GNA12Q03113 381 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 DNM1Q05193 864 aaKnown RBP9.15□□□□□ -0.94
PRKCH-218ENST00000555628 KLRB1Q12918 225 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 LRRC14Q15048 493 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 FOXD4L6Q3SYB3 417 aaPredicted RBP9.15□□□□□ -0.94
PRKCH-218ENST00000555628 PTPN20Q4JDL3 420 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 ATP1A1-AS1Q5TC04 95 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 SPECC1LQ69YQ0 1117 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 TRNP1Q6NT89 227 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 FOXD4L3Q6VB84 417 aaPredicted RBP9.15□□□□□ -0.94
PRKCH-218ENST00000555628 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 NLRP14Q86W24 1093 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 NRROSQ86YC3 692 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 CACNA2D3Q8IZS8 1091 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 OR2AP1Q8NGE2 309 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 CCL4L1Q8NHW4 92 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 KLHL32Q96NJ5 620 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 WRAP53Q9BUR4 548 aaKnown RBP9.15□□□□□ -0.94
PRKCH-218ENST00000555628 APOOQ9BUR5 198 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 OSBPL1AQ9BXW6 950 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 GOLPH3LQ9H4A5 285 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 ATP13A1Q9HD20 1204 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 PDP2Q9P2J9 529 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 KLQ9UEF7 1012 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 TP53TG5Q9Y2B4 290 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 COQ6Q9Y2Z9 468 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 MFHAS1Q9Y4C4 1052 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 ST14Q9Y5Y6 855 aa9.15□□□□□ -0.94
PRKCH-218ENST00000555628 LOC101059948A0A1B0GTJ6 334 aa9.14□□□□□ -0.95
PRKCH-218ENST00000555628 WIPF3A6NGB9 483 aa9.14□□□□□ -0.95
PRKCH-218ENST00000555628 B4E171 279 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms