RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TCN1P20061 433 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-209ENST00000555609 MRPL19P49406 292 aaKnown RBP16.21■□□□□ 0.19
TUBB3-209ENST00000555609 SUOXP51687 545 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 BEX3Q00994 111 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 FOXM1Q08050 763 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 BNIP2Q12982 314 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 MYLK3Q32MK0 819 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 UNC50Q53HI1 259 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 IYDQ6PHW0 289 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 ISCA2Q86U28 154 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 MON1AQ86VX9 555 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 RNF135Q8IUD6 432 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 OR2T34Q8NGX1 318 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 OR2T3Q8NH03 318 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 LPPQ93052 612 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 C19orf60Q96EN9 201 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 SLC39A13Q96H72 371 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 GPATCH1Q9BRR8 931 aaKnown RBP16.21■□□□□ 0.19
TUBB3-209ENST00000555609 MTG1Q9BT17 334 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-209ENST00000555609 ZYG11BQ9C0D3 744 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 PRDM5Q9NQX1 630 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-209ENST00000555609 NDFIP2Q9NV92 336 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 TUBA8Q9NY65 449 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-209ENST00000555609 APPL1Q9UKG1 709 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 PATJQ8NI35 1801 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 LOC285095A0A1B0GVY8 99 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 AURKAO14965 403 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 HNRNPRO43390 633 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 MATN4O95460 622 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 EPOP01588 193 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 C7P10643 843 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 GPX3P22352 226 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 FDXRP22570 491 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 AFF1P51825 1210 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 PRAMEP78395 509 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 TUSC3Q13454 348 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 CD300LGQ6UXG3 332 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 C14orf80Q86SX3 495 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 LRRTM3Q86VH5 581 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 EGFL6Q8IUX8 553 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 MINDY1Q8N5J2 469 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 TSPAN14Q8NG11 270 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 OR10T2Q8NGX3 314 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ZFP28Q8NHY6 868 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 LRTOMTQ8WZ04 291 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 GFM2Q969S9 779 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 SLCO4A1Q96BD0 722 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 NOL6Q9H6R4 1146 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 NT5MQ9NPB1 228 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 GID8Q9NWU2 228 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ABCD2Q9UBJ2 740 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 SFMBT1Q9UHJ3 866 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 SCML2Q9UQR0 700 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 MYRFQ9Y2G1 1151 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 C7orf72A4D263 438 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 SUPT7LO94864 414 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 CELF2O95319 508 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 HSD17B1P14061 328 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 GRIK1P39086 918 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 MGAT3Q09327 533 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 GRIK2Q13002 908 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 MTA1Q13330 715 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 INPP5AQ14642 412 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 PCSK7Q16549 785 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ZNF789Q5FWF6 425 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 C6orf10Q5SRN2 563 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 SPRYD7Q5W111 196 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 MRNIPQ6NTE8 343 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ERMP1Q7Z2K6 904 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ZNF683Q8IZ20 524 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 FAM156AQ8NDB6 213 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 PHF21BQ96EK2 531 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 TCF12Q99081 682 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ANKRD60Q9BZ19 345 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 GRIP2Q9C0E4 1043 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 PCDHAC1Q9H158 963 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 TFB2MQ9H5Q4 396 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 CCM2LQ9NUG4 571 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 PTBP2Q9UKA9 531 aaKnown RBP16.2■□□□□ 0.18
TUBB3-209ENST00000555609 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 FIS1Q9Y3D6 152 aa16.2■□□□□ 0.18
TUBB3-209ENST00000555609 TRIP12Q14669 1992 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 IGLV3-10A0A075B6K4 115 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 H3BNH8 94 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 HLA-DPA1P20036 260 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 OGNP20774 298 aaKnown RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 CD86P42081 329 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 BRCC3P46736 316 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 ALDH3B2P48448 385 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 ATP6V0D1P61421 351 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 BIRC2Q13490 618 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 PPP1R3AQ16821 1122 aa16.19■□□□□ 0.18
TUBB3-209ENST00000555609 PABPC1LQ4VXU2 614 aaKnown RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 LRRC23Q53EV4 343 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 INTS11Q5TA45 600 aaKnown RBP16.19■□□□□ 0.18
TUBB3-209ENST00000555609 CST9Q5W186 159 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms