RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 C1QTNF9P0C862 333 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 ZFXP17010 805 aaPredicted RBP20.56■□□□□ 0.88
VTI1B-205ENST00000555543 JUNDP17535 347 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 CTPS1P17812 591 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 PTK2BQ14289 1009 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 PDK1Q15118 436 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 TSPAN33Q86UF1 283 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 GATA6Q92908 595 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 APOOQ9BUR5 198 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 TDRD1Q9BXT4 1180 aaKnown RBP20.56■□□□□ 0.88
VTI1B-205ENST00000555543 SAE1Q9UBE0 346 aaPredicted RBP20.56■□□□□ 0.88
VTI1B-205ENST00000555543 PPIL1Q9Y3C6 166 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 MSRB2Q9Y3D2 182 aa20.56■□□□□ 0.88
VTI1B-205ENST00000555543 BTNL10A8MVZ5 291 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 H3BM21 787 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 SCAMP1O15126 338 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 MMP2P08253 660 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 PECAM1P16284 738 aaPredicted RBP20.55■□□□□ 0.88
VTI1B-205ENST00000555543 VAV2P52735 878 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 AP1B1Q10567 949 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 ZNF211Q13398 564 aaPredicted RBP20.55■□□□□ 0.88
VTI1B-205ENST00000555543 MTM1Q13496 603 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 ACOX1Q15067 660 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 KAZNQ674X7 775 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 KCTD16Q68DU8 428 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 DHRS13Q6UX07 377 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 HSD11B1LQ7Z5J1 315 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 PHACTR4Q8IZ21 702 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 CBARPQ8N350 705 aaPredicted RBP20.55■□□□□ 0.88
VTI1B-205ENST00000555543 SCRN2Q96FV2 425 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 IMPACTQ9P2X3 320 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 APOBEC3BQ9UH17 382 aaKnown RBP20.55■□□□□ 0.88
VTI1B-205ENST00000555543 CHKBQ9Y259 395 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 FREM2Q5SZK8 3169 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 LRP4O75096 1905 aa20.55■□□□□ 0.88
VTI1B-205ENST00000555543 hCG_1818297A0A087WSY0 165 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 A0A0U1RQJ8 604 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 K7ESM1 405 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 PPP1R12AO14974 1030 aaPredicted RBP20.54■□□□□ 0.88
VTI1B-205ENST00000555543 PJA2O43164 708 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 CST8O60676 142 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 PRLP01236 227 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 CYP2A6P11509 494 aaPredicted RBP20.54■□□□□ 0.88
VTI1B-205ENST00000555543 CKMT2P17540 419 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 CES1P23141 567 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 PEX5P50542 639 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 CLDN6P56747 220 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 NFATC4Q14934 902 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 DENND2CQ68D51 928 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 UNQ6494/PRO21346Q6UXR6 183 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 USP45Q70EL2 814 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 MARCH9Q86YJ5 346 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 NUS1Q96E22 293 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 DESI2Q9BSY9 194 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 LRRC61Q9BV99 259 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 NLGN3Q9NZ94 848 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 PCDHGA1Q9Y5H4 931 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 PLXNB3Q9ULL4 1909 aa20.54■□□□□ 0.88
VTI1B-205ENST00000555543 LY6G6EA0A0G2JKS1 128 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 A0A0J9YYE9 177 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 AQP9O43315 295 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 GCATO75600 419 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 RFPL3O75679 317 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 ZRANB2O95218 330 aaKnown RBP eCLIP20.53■□□□□ 0.88
VTI1B-205ENST00000555543 TRBC1P01850 177 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 MYF5P13349 255 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 CTNNA1P35221 906 aaKnown RBP20.53■□□□□ 0.88
VTI1B-205ENST00000555543 HNF1BP35680 557 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 ETV3P41162 512 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 CD86P42081 329 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 SKOR1P84550 965 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 C1orf61Q13536 156 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 TFDP2Q14188 446 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 PRKD1Q15139 912 aaPredicted RBP20.53■□□□□ 0.88
VTI1B-205ENST00000555543 ALG11Q2TAA5 492 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 PRRT3Q5FWE3 981 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 TFDP3Q5H9I0 405 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 ESRP1Q6NXG1 681 aaKnown RBP20.53■□□□□ 0.88
VTI1B-205ENST00000555543 TMPRSS7Q7RTY8 843 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 EXD1Q8NHP7 514 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 LMX1AQ8TE12 382 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 TSACCQ96A04 125 aaPredicted RBP20.53■□□□□ 0.88
VTI1B-205ENST00000555543 FUBP1Q96AE4 644 aaKnown RBP20.53■□□□□ 0.88
VTI1B-205ENST00000555543 DTD2Q96FN9 168 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 HAUS2Q9NVX0 235 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 SEPT10Q9P0V9 454 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 TRIM10Q9UDY6 481 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 U3KQA8 63 aa20.53■□□□□ 0.88
VTI1B-205ENST00000555543 KMT2BQ9UMN6 2715 aaPredicted RBP20.52■□□□□ 0.88
VTI1B-205ENST00000555543 GRID2IPA4D2P6 1211 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 NEMP2A6NFY4 417 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 CELA2BP08218 269 aaPredicted RBP20.52■□□□□ 0.88
VTI1B-205ENST00000555543 TGM2P21980 687 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 NFKBIAP25963 317 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 PPARDQ03181 441 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 SMAD1Q15797 465 aaKnown RBP20.52■□□□□ 0.88
VTI1B-205ENST00000555543 DEFB133Q30KQ1 61 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 FAXCQ5TGI0 409 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 CRTC1Q6UUV9 634 aa20.52■□□□□ 0.88
VTI1B-205ENST00000555543 ENPP7Q6UWV6 458 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms