RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NR1H2P55055 460 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 RHBDL3P58872 404 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 YWHAZP63104 245 aaKnown RBP3.53□□□□□ -1.84
SNX6-204ENST00000555541 TBL3Q12788 808 aaKnown RBP3.53□□□□□ -1.84
SNX6-204ENST00000555541 RUNX2Q13950 521 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 EFR3AQ14156 821 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 ARHGEF6Q15052 776 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 PPP6R3Q5H9R7 873 aaPredicted RBP3.53□□□□□ -1.84
SNX6-204ENST00000555541 NOL8Q76FK4 1167 aaKnown RBP3.53□□□□□ -1.84
SNX6-204ENST00000555541 SLC9B2Q86UD5 537 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 TBC1D26Q86UD7 250 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 NFE4Q86UQ8 179 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 PARP16Q8N5Y8 322 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 GJC3Q8NFK1 279 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 ERGIC1Q969X5 290 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 ALG14Q96F25 216 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 TMEM19Q96HH6 336 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 COG8Q96MW5 612 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 TWNKQ96RR1 684 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 CD180Q99467 661 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 PDS5AQ29RF7 1337 aaKnown RBP3.52□□□□□ -1.85
SNX6-204ENST00000555541 ASPDHA6ND91 283 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 EXTL3O43909 919 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 KLK8O60259 260 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 TSPAN3O60637 253 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 PCNAP12004 261 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 GPTP24298 496 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 CHATP28329 748 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 HNRNPH1P31943 449 aaKnown RBP3.52□□□□□ -1.85
SNX6-204ENST00000555541 ARL4CP56559 192 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 RELQ04864 619 aaPredicted RBP3.52□□□□□ -1.85
SNX6-204ENST00000555541 NAA25Q14CX7 972 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 C10orf62Q5T681 223 aaPredicted RBP3.52□□□□□ -1.85
SNX6-204ENST00000555541 LSM14AQ8ND56 463 aaKnown RBP3.52□□□□□ -1.85
SNX6-204ENST00000555541 TBC1D20Q96BZ9 403 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 TAOK3Q9H2K8 898 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 ALKBH4Q9NXW9 302 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 CDC14AQ9UNH5 594 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 NFE2L3Q9Y4A8 694 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 PSAT1Q9Y617 370 aa3.52□□□□□ -1.85
SNX6-204ENST00000555541 IGKV3D-15A0A087WSY6 115 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 IGKV3D-20A0A0C4DH25 116 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 LILRA5A6NI73 299 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 SOCS6O14544 535 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 PLRG1O43660 514 aaKnown RBP3.51□□□□□ -1.85
SNX6-204ENST00000555541 CDH1P12830 882 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 SLC2A4P14672 509 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 CLDN2P57739 230 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 ATP13A5Q4VNC0 1218 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 FBXO47Q5MNV8 452 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 FAM122CQ6P4D5 195 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 GFRALQ6UXV0 394 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 FAM160B2Q86V87 743 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 TMEM219Q86XT9 240 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 FOXRED2Q8IWF2 684 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 CHERPQ8IWX8 916 aaKnown RBP3.51□□□□□ -1.85
SNX6-204ENST00000555541 CCT6BQ92526 530 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 STAMQ92783 540 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 ZC3HAV1LQ96H79 300 aaKnown RBP3.51□□□□□ -1.85
SNX6-204ENST00000555541 F2RL3Q96RI0 385 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 PHF7Q9BWX1 381 aaPredicted RBP3.51□□□□□ -1.85
SNX6-204ENST00000555541 ITM2CQ9NQX7 267 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 SMYD2Q9NRG4 433 aa3.51□□□□□ -1.85
SNX6-204ENST00000555541 ATXN2Q99700 1313 aaKnown RBP3.5□□□□□ -1.85
SNX6-204ENST00000555541 TIPRLO75663 272 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 MTA2O94776 668 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 CD58P19256 250 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 ALDH4A1P30038 563 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 STX2P32856 288 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 CHRNDQ07001 517 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 BSPRYQ5W0U4 402 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 ARHGAP11AQ6P4F7 1023 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 ZNF497Q6ZNH5 498 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 ODF3L1Q8IXM7 274 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 KIAA2013Q8IYS2 634 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 NKAPQ8N5F7 415 aaKnown RBP3.5□□□□□ -1.85
SNX6-204ENST00000555541 ANKRD9Q96BM1 317 aaPredicted RBP3.5□□□□□ -1.85
SNX6-204ENST00000555541 LGALS12Q96DT0 336 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 EYA3Q99504 573 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 REEP2Q9BRK0 252 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 MXRA8Q9BRK3 442 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 TMEM30AQ9NV96 361 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 CISD1Q9NZ45 108 aaKnown RBP3.5□□□□□ -1.85
SNX6-204ENST00000555541 CARD8Q9Y2G2 431 aa3.5□□□□□ -1.85
SNX6-204ENST00000555541 EDN2P20800 178 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 PMP22Q01453 160 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 PPIGQ13427 754 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNX6-204ENST00000555541 OS9Q13438 667 aaPredicted RBP3.49□□□□□ -1.85
SNX6-204ENST00000555541 SLC12A1Q13621 1099 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 NEDD9Q14511 834 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 ZNF667Q5HYK9 610 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 WDR45BQ5MNZ6 344 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 MAP3K21Q5TCX8 1036 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 SERTAD4-AS1Q5TG53 156 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 ZNF772Q68DY9 489 aaPredicted RBP3.49□□□□□ -1.85
SNX6-204ENST00000555541 B3GNT6Q6ZMB0 384 aa3.49□□□□□ -1.85
SNX6-204ENST00000555541 CCNI2Q6ZMN8 369 aaPredicted RBP3.49□□□□□ -1.85
SNX6-204ENST00000555541 ADGRG6Q86SQ4 1221 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms