RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC1A1P43005 524 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 HADHBP55084 474 aaKnown RBP11.87□□□□□ -0.51
VRK1-204ENST00000555351 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
VRK1-204ENST00000555351 TAS2R40P59535 323 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 SRP54P61011 504 aaKnown RBP11.87□□□□□ -0.51
VRK1-204ENST00000555351 CYP4F3Q08477 520 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 ALG11Q2TAA5 492 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 ATP13A4Q4VNC1 1196 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 ARMC12Q5T9G4 340 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 GKN2Q86XP6 184 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 OR6C4Q8NGE1 309 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 IFI44Q8TCB0 444 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 RNF157Q96PX1 679 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 DEPDC7Q96QD5 511 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 RBM15Q96T37 977 aaKnown RBP eCLIP11.87□□□□□ -0.51
VRK1-204ENST00000555351 CHP1Q99653 195 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 CLPBQ9H078 707 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 BRD8Q9H0E9 1235 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 B4GALT6Q9UBX8 382 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 KLQ9UEF7 1012 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 PNMA8BQ9ULN7 279 aaPredicted RBP11.87□□□□□ -0.51
VRK1-204ENST00000555351 PCDHGC4Q9Y5F7 938 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 LRP4O75096 1905 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 SPEGQ15772 3267 aa11.87□□□□□ -0.51
VRK1-204ENST00000555351 TDRD6O60522 2096 aaKnown RBP11.87□□□□□ -0.51
VRK1-204ENST00000555351 A0A087WV48 116 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 YY2O15391 372 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 TCEA3O75764 348 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 TNFP01375 233 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 PYGLP06737 847 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 CTSEP14091 401 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 CCNB1P14635 433 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ZFXP17010 805 aaPredicted RBP11.86□□□□□ -0.51
VRK1-204ENST00000555351 ZNF30P17039 623 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 DPTQ07507 201 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 TRAF2Q12933 501 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 MESDQ14696 234 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ACOX1Q15067 660 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 CNGA3Q16281 694 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 SLC9A4Q6AI14 798 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 PNCKQ6P2M8 343 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ENPP7Q6UWV6 458 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ZNF765Q7L2R6 523 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 HID1Q8IV36 788 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 RBFAQ8N0V3 343 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 PQLC3Q8N755 202 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 OR56A4Q8NGH8 313 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 PIH1D2Q8WWB5 315 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
VRK1-204ENST00000555351 DTD2Q96FN9 168 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
VRK1-204ENST00000555351 SEMA3CQ99985 751 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ABCG4Q9H172 646 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
VRK1-204ENST00000555351 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 NT5MQ9NPB1 228 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 DDX56Q9NY93 547 aaKnown RBP11.86□□□□□ -0.51
VRK1-204ENST00000555351 DTLQ9NZJ0 730 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 GPSM3Q9Y4H4 160 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 OR1A2Q9Y585 309 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 RAI2Q9Y5P3 530 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 ANKRD11Q6UB99 2663 aaPredicted RBP11.86□□□□□ -0.51
VRK1-204ENST00000555351 ZZEF1O43149 2961 aa11.86□□□□□ -0.51
VRK1-204ENST00000555351 WDFY3Q8IZQ1 3526 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 CHD6Q8TD26 2715 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 LCA5LO95447 670 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 PRKCGP05129 697 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 PCCBP05166 539 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 MYCLP1P12525 358 aaPredicted RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 MAXP61244 160 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 PPIDQ08752 370 aaKnown RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 ARHGEF7Q14155 803 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 IGF2-ASQ6U949 168 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 KDM7AQ6ZMT4 941 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 MARCH9Q86YJ5 346 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 RHOT1Q8IXI2 618 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 SLC35F3Q8IY50 421 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 CCDC170Q8IYT3 715 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 LSMEM2Q8N112 164 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 ARL10Q8N8L6 244 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 PLA2G15Q8NCC3 412 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 MAPK15Q8TD08 544 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 PDCD6IPQ8WUM4 868 aaKnown RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 TSACCQ96A04 125 aaPredicted RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 NUS1Q96E22 293 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 LYSMD1Q96S90 227 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 PHPT1Q9NRX4 125 aaPredicted RBP11.85□□□□□ -0.51
VRK1-204ENST00000555351 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 RBM22Q9NW64 420 aaKnown RBP eCLIP11.85□□□□□ -0.51
VRK1-204ENST00000555351 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 DOLKQ9UPQ8 538 aa11.85□□□□□ -0.51
VRK1-204ENST00000555351 MYLKQ15746 1914 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms