RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SCRN2Q96FV2 425 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 NSMCE3Q96MG7 304 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 QKIQ96PU8 341 aaKnown RBP eCLIP12.14□□□□□ -0.474e-9■■■■■ 35.8
SRP54-206ENST00000555317 TDRD1Q9BXT4 1180 aaKnown RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 SLC25A51Q9H1U9 297 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 LZTFL1Q9NQ48 299 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 KCTD5Q9NXV2 234 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 GOLGA6AQ9NYA3 693 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 PCOLCE2Q9UKZ9 415 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 PACSIN2Q9UNF0 486 aaPredicted RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 RPL26L1Q9UNX3 145 aaKnown RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 EFR3BQ9Y2G0 817 aa12.14□□□□□ -0.47
SRP54-206ENST00000555317 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
SRP54-206ENST00000555317 A0A0U1RQJ8 604 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 SPTY2D1-AS1A0A0U1RR47 76 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 MED19A0JLT2 244 aaPredicted RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 NPIPB15A6NHN6 443 aaPredicted RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 PSMD11O00231 422 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 CACNB4O00305 520 aaPredicted RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 SDC3O75056 442 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 PDHA1P08559 390 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 ALPPL2P10696 532 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 PTPN3P26045 913 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 PEX5P50542 639 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRP54-206ENST00000555317 NIPAL4Q0D2K0 466 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 XRCC4Q13426 336 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 MTM1Q13496 603 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 CNGA3Q16281 694 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 PCSK7Q16549 785 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 WSCD2Q2TBF2 565 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 TEX44Q53QW1 395 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 ARRDC2Q8TBH0 407 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 PIH1D2Q8WWB5 315 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 HTR3CQ8WXA8 447 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 ALG3Q92685 438 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 BMFQ96LC9 184 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 MCCC1Q96RQ3 725 aaPredicted RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRP54-206ENST00000555317 VAT1Q99536 393 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 SLC13A1Q9BZW2 595 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 GLOD4Q9HC38 313 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 MBNL1Q9NR56 388 aaKnown RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 APOBEC2Q9Y235 224 aaKnown RBP12.13□□□□□ -0.47
SRP54-206ENST00000555317 CAPN6Q9Y6Q1 641 aa12.13□□□□□ -0.47
SRP54-206ENST00000555317 A0A0J9YYE9 177 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 NEMP2A6NFY4 417 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 CAPN8A6NHC0 703 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 TRBC1P01850 177 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ADRB1P08588 477 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ALPIP09923 528 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 PYGMP11217 842 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ZNF30P17039 623 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 KELP23276 732 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 HNF1BP35680 557 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 BLKP51451 505 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 EIF3EP60228 445 aaKnown RBP12.12□□□□□ -0.47
SRP54-206ENST00000555317 PFN3P60673 137 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 SKOR1P84550 965 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 OTUD4Q01804 1114 aaKnown RBP12.12□□□□□ -0.47
SRP54-206ENST00000555317 ADCY2Q08462 1091 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
SRP54-206ENST00000555317 FZD2Q14332 565 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 INPP5AQ14642 412 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 AGERQ15109 404 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 NOMO1Q15155 1222 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ZNF542PQ5EBM4 170 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 LRRC66Q68CR7 880 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ITPRIPL1Q6GPH6 555 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 DARS2Q6PI48 645 aaKnown RBP12.12□□□□□ -0.47
SRP54-206ENST00000555317 MACC1Q6ZN28 852 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 EID2Q8N6I1 236 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 TTC13Q8NBP0 860 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ACTL9Q8TC94 416 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 BTN2A2Q8WVV5 523 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 IMP4Q96G21 291 aaKnown RBP12.12□□□□□ -0.47
SRP54-206ENST00000555317 TEKT5Q96M29 485 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 WDR26Q9H7D7 661 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 RSPH14Q9UHP6 348 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 TRHDEQ9UKU6 1024 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 BTBD3Q9Y2F9 522 aa12.12□□□□□ -0.47
SRP54-206ENST00000555317 ARID1BQ8NFD5 2236 aaPredicted RBP12.12□□□□□ -0.47
SRP54-206ENST00000555317 ACACBO00763 2458 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 C1orf232A0A0U1RR37 186 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 PDE2AO00408 941 aaPredicted RBP12.11□□□□□ -0.47
SRP54-206ENST00000555317 FFAR2O15552 330 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 TNFSF14O43557 240 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 FZD6O60353 706 aa12.11□□□□□ -0.47
SRP54-206ENST00000555317 CBFA2T3O75081 653 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms