RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NAE1Q13564 534 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 RABEP1Q15276 862 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ADIPOQQ15848 244 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZSCAN23Q3MJ62 389 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 FBXO46Q6PJ61 603 aaPredicted RBP5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 QSOX2Q6ZRP7 698 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 MON1BQ7L1V2 547 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 WDR63Q8IWG1 891 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 C7orf57Q8NEG2 295 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZNF548Q8NEK5 533 aaPredicted RBP5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 SLC25A28Q96A46 364 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 SLC41A2Q96JW4 573 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 POT1Q9NUX5 634 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 CISD1Q9NZ45 108 aaKnown RBP5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 CNOT8Q9UFF9 292 aaKnown RBP5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 POLG2Q9UHN1 485 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 SNX8Q9Y5X2 465 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 MAU2Q9Y6X3 613 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 LY6G6EA0A0G2JKS1 128 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 KDM4EB2RXH2 506 aaPredicted RBP5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 AKR1B15C9JRZ8 316 aaPredicted RBP5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 SOCS2O14508 198 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 LDB2O43679 373 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 OR2C1O95371 312 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 STARD3NLO95772 234 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 CYP1A2P05177 515 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 IL7RP16871 459 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 PIK3CAP42336 1068 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 P2RX3P56373 397 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 NEDD9Q14511 834 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 PRTGQ2VWP7 1150 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 OTUD1Q5VV17 481 aaPredicted RBP5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 JADE1Q6IE81 842 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 PLEKHA7Q6IQ23 1121 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 DPY19L2P1Q6NXN4 242 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 ENOSF1Q7L5Y1 443 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 C17orf53Q8N3J3 647 aaPredicted RBP5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 AGBL3Q8NEM8 1001 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 GPT2Q8TD30 523 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 C1QTNF5Q9BXJ0 243 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 DDX4Q9NQI0 724 aaKnown RBP5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMEM51Q9NW97 253 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 IL36RNQ9UBH0 155 aa5.55□□□□□ -1.52
CKS1BP1-201ENST00000555221 FAM90A8PA6NJQ4 464 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 CDRT15L2A8MXV6 281 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 H0YGN5 161 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 VWA5AO00534 786 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 FAM90A13PP0C7W8 464 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 FAM90A24PP0C7X0 464 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 RAD23BP54727 409 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 LAMB3Q13751 1172 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 KLF9Q13886 244 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 NAB2Q15742 525 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 SOWAHCQ53LP3 525 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 RAB41Q5JT25 222 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 PIM3Q86V86 326 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 HACE1Q8IYU2 909 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 RNF168Q8IYW5 571 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 JAKMIP2Q96AA8 810 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 SEPT5Q99719 369 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 FOXP1Q9H334 677 aaPredicted RBP5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZBTB40Q9NUA8 1239 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 PAM16Q9Y3D7 125 aa5.54□□□□□ -1.52
CKS1BP1-201ENST00000555221 KAT6BQ8WYB5 2073 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 A0A1W2PQ09 198 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 RPS10-NUDT3A0A1W2PQS6 291 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 WDR91A4D1P6 747 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 BTBD18B2RXH4 712 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 PPEF2O14830 753 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ITM2AO43736 263 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 HS6ST1O60243 411 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 FGF2P09038 288 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 DDX5P17844 614 aaKnown RBP5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 GABRB1P18505 474 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 GCH1P30793 250 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 THPOP40225 353 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 MRPS21P82921 87 aaKnown RBP5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ACSM2AQ08AH3 577 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 LRMPQ12912 555 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 STK4Q13043 487 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 TWIST1Q15672 202 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ETFDHQ16134 617 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ASTE1Q2TB18 679 aaPredicted RBP5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZNF284Q2VY69 593 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 PCGF3Q3KNV8 242 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 DNTTIP2Q5QJE6 756 aaKnown RBP5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 MFSD4BQ5TF39 518 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ACSM2BQ68CK6 577 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 COLCA1Q6ZS62 124 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 Q6ZTK2 550 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 SEPT14Q6ZU15 432 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZNF367Q7RTV3 350 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 CTU1Q7Z7A3 348 aaKnown RBP5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 HAPLN4Q86UW8 402 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 CCDC13Q8IYE1 715 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 TRIB2Q92519 343 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZKSCAN4Q969J2 545 aaPredicted RBP5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ERGIC1Q969X5 290 aa5.53□□□□□ -1.52
CKS1BP1-201ENST00000555221 ERP27Q96DN0 273 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms