RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 NFS1Q9Y697 457 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 SHROOM3Q8TF72 1996 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 METTL12A8MUP2 240 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 TRAFD1O14545 582 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FSBPO95073 299 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 LMNAP02545 664 aaKnown RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 CYP2A6P11509 494 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 HOXD12P35452 270 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 GRIA1P42261 906 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 ABL2P42684 1182 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 GRIA4P48058 902 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 CCR5P51681 352 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 GEMP55040 296 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 RPS21P63220 83 aaKnown RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FAM193AP78312 1265 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 SKOR1P84550 965 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 DHX9Q08211 1270 aaKnown RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 NIPAL4Q0D2K0 466 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 CALCOCO2Q13137 446 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 MPP3Q13368 585 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 SEMA5AQ13591 1074 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PCSK7Q16549 785 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 LPAL2Q16609 132 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PARP6Q2NL67 630 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 SETMARQ53H47 684 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 C4orf22Q6V702 233 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 ZNF534Q76KX8 674 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 RABEPKQ7Z6M1 372 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 CAND1Q86VP6 1230 aaKnown RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 HOOK3Q86VS8 718 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 TRIM69Q86WT6 500 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 RELL1Q8IUW5 271 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PPIL6Q8IXY8 311 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 ZCCHC9Q8N567 271 aaKnown RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FRMD1Q8N878 549 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 LPCAT1Q8NF37 534 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 CXorf40AQ8TE69 158 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FEM1CQ96JP0 617 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FCRL5Q96RD9 977 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 RBM15Q96T37 977 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FMO2Q99518 471 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 WDR83Q9BRX9 315 aaKnown RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 C1QTNF7Q9BXJ2 289 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 C6orf106Q9H6K1 298 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 LRRC4CQ9HCJ2 640 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PCDH12Q9NPG4 1184 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 RAB6BQ9NRW1 208 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 NCDNQ9UBB6 729 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 SUSD2Q9UGT4 822 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PHTF1Q9UMS5 762 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-218ENST00000555213 FADS3Q9Y5Q0 445 aa10.96□□□□□ -0.65
SHMT2-218ENST00000555213 PLXND1Q9Y4D7 1925 aa10.96□□□□□ -0.66
SHMT2-218ENST00000555213 A0A1W2PQU0 124 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 E7ESA3 106 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 AREL1O15033 823 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 RNGTTO60942 597 aaKnown RBP10.95□□□□□ -0.66
SHMT2-218ENST00000555213 PMPCBO75439 489 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 GNSP15586 552 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 TIMP2P16035 220 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 PSMB4P28070 264 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 HSD17B3P37058 310 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 MMP12P39900 470 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 MAGEA3P43357 314 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 TAS2R38P59533 333 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 CREB5Q02930 508 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 LRRC73Q5JTD7 316 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 KCTD11Q693B1 232 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 HDXQ7Z353 690 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 PRPF39Q86UA1 669 aaKnown RBP10.95□□□□□ -0.66
SHMT2-218ENST00000555213 HORMAD1Q86X24 394 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 IGDCC3Q8IVU1 814 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 RGL4Q8IZJ4 473 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 DEFB119Q8N690 84 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 MCUQ8NE86 351 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 IPMKQ8NFU5 416 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 RMDN1Q96DB5 314 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 NSMCE3Q96MG7 304 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 SRPK1Q96SB4 655 aaKnown RBP10.95□□□□□ -0.66
SHMT2-218ENST00000555213 MLPHQ9BV36 600 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-218ENST00000555213 FOXP3Q9BZS1 431 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 SHOC2Q9UQ13 582 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 DMTF1Q9Y222 760 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 CHKBQ9Y259 395 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 ITM2BQ9Y287 266 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 PCDHGA5Q9Y5G8 931 aa10.95□□□□□ -0.66
SHMT2-218ENST00000555213 CAPN8A6NHC0 703 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 E7EVH7 732 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PROB1E7EW31 1015 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 F5H423 210 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-218ENST00000555213 GOLGA8MH3BSY2 632 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 PSMD3O43242 534 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 FZD6O60353 706 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 AVILO75366 819 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 BANF1O75531 89 aa10.94□□□□□ -0.66
SHMT2-218ENST00000555213 EPN2O95208 641 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms