RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 WRAP53Q9BUR4 548 aaKnown RBP6.9□□□□□ -1.3
SYNE2-216ENST00000555002 LDAHQ9H6V9 325 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 JMJD4Q9H9V9 463 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 SSR3Q9UNL2 185 aa6.9□□□□□ -1.3
SYNE2-216ENST00000555002 A0A087WXM4 84 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 AHCYL1O43865 530 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 HCN1O60741 890 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 MED24O75448 989 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 RPS12P25398 132 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 PRKCDQ05655 676 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 SLC20A2Q08357 652 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 WSCD1Q658N2 575 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 SLC25A25Q6KCM7 469 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 PCDH20Q8N6Y1 951 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 GIPC3Q8TF64 312 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 LRRN4Q8WUT4 740 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TLE6Q9H808 572 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TRPV2Q9Y5S1 764 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 G3V2T6 193 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 SUV39H1O43463 412 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 NT5EP21589 574 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 SLC12A3P55017 1021 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 CPTPQ5TA50 214 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 BROXQ5VW32 411 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 SPESP1Q6UW49 350 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 CPA6Q8N4T0 437 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 AP1S3Q96PC3 154 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 COPS7AQ9UBW8 275 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF639Q9UID6 485 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 GTF3C4Q9UKN8 822 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 PRRC2BQ5JSZ5 2229 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ADAMTS12P58397 1594 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 WASHC1A8K0Z3 465 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 WASH3PC4AMC7 463 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ZBTB22O15209 634 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TRAPPC6AO75865 159 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 KRT36O76013 467 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 SCGB1D2O95969 90 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 CSN2P05814 226 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 HDCP19113 662 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ITPKAP23677 461 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 NR2C2P49116 596 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 PEX6Q13608 980 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ACVR2BQ13705 512 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 WDR59Q6PJI9 974 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 WASH2PQ6VEQ5 465 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 GPRIN3Q6ZVF9 776 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TMC8Q8IU68 726 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TTC29Q8NA56 475 aaPredicted RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 LPPQ93052 612 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF350Q9GZX5 532 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 KIF20BQ96Q89 1820 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 FADS2O95864 444 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TRBC1P01850 177 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 RARGP13631 454 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ME2P23368 584 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 RPL21P46778 160 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ADARP55265 1226 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ITGB3BPQ13352 177 aaPredicted RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 USF2Q15853 346 aaPredicted RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 PCNX4Q63HM2 1172 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 KLHL35Q6PF15 583 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 LIX1Q8N485 282 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 DNAJB14Q8TBM8 379 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 CRAMP1Q96RY5 1269 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 HMX1Q9NP08 348 aaPredicted RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 PNO1Q9NRX1 252 aaKnown RBP6.9□□□□□ -1.31
SYNE2-216ENST00000555002 TMLHEQ9NVH6 421 aa6.9□□□□□ -1.31
SYNE2-216ENST00000555002 H3BRB1 525 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CASKO14936 926 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 OR1I1O60431 355 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 GJB6O95452 261 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ARP10275 920 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PTPN9P43378 593 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CASP5P51878 434 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RFT1Q96AA3 541 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 AXLP30530 894 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 SMARCD3Q6STE5 483 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 THAP5Q7Z6K1 395 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 DNAAF5Q86Y56 855 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 OR6K2Q8NGY2 324 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 OR14C36Q8NHC7 312 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF471Q9BX82 626 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 CDC42EP4Q9H3Q1 356 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 SGK2Q9HBY8 427 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF224Q9NZL3 707 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 PNPLA7Q6ZV29 1317 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 USP42Q9H9J4 1324 aaKnown RBP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 S100A2P29034 98 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.31
SYNE2-216ENST00000555002 FAM153CQ494X1 144 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 LYPLAL1Q5VWZ2 237 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 SLC22A15Q8IZD6 547 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
SYNE2-216ENST00000555002 RASSF5Q8WWW0 418 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms