RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 PCDHGC4Q9Y5F7 938 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 ITM2AO43736 263 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PGLSO95336 258 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 SRCP12931 536 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 FDXRP22570 491 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PBX2P40425 430 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CLCN5P51795 746 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CDKN2DP55273 166 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 AP1S1P61966 158 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 POU4F1Q01851 419 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 TUBB3Q13509 450 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CDH18Q13634 790 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 LAMB3Q13751 1172 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ZNF460Q14592 562 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ATXN7L2Q5T6C5 722 aaPredicted RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 MAVSQ7Z434 540 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 C10orf107Q8IVU9 208 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CALML6Q8TD86 181 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 E2F7Q96AV8 911 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 SKA1Q96BD8 255 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 MYO19Q96H55 970 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 MRGPRX3Q96LB0 322 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 MYLK2Q9H1R3 596 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 HAO1Q9UJM8 370 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PRSS56P0CW18 603 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 GRIA4P48058 902 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 TAS2R39P59534 338 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 PDE1BQ01064 536 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 CHI3L2Q15782 390 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 GRASPQ7Z6J2 395 aaPredicted RBP8.92□□□□□ -0.98
TDP1-210ENST00000554976 ADGRG2Q8IZP9 1017 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 GIMAP7Q8NHV1 300 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 ITFG1Q8TB96 612 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 RDH11Q8TC12 318 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 DDI1Q8WTU0 396 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 CDKN2AIPNLQ96HQ2 116 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 SUDS3Q9H7L9 328 aaPredicted RBP8.92□□□□□ -0.98
TDP1-210ENST00000554976 ZMYM5Q9UJ78 669 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 SLC39A10Q9ULF5 831 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 A0A087X1B8 175 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 CCDC195A0A1B0GUA6 201 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 TYW5A2RUC4 315 aaKnown RBP8.92□□□□□ -0.98
TDP1-210ENST00000554976 PER2O15055 1255 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 DNAJC6O75061 913 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 KLHL2O95198 593 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 CISD3P0C7P0 127 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 PIRTP0C851 137 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 SLC8A1P32418 973 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 STC1P52823 247 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 BNIP1Q12981 228 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 GPM6BQ13491 265 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 FAM91A1Q658Y4 838 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 ZYG11AQ6WRX3 759 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 TRIM42Q8IWZ5 723 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 BLOC1S5Q8TDH9 187 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 LYSMD1Q96S90 227 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 C2orf49Q9BVC5 232 aaPredicted RBP8.92□□□□□ -0.98
TDP1-210ENST00000554976 MTIF3Q9H2K0 278 aaKnown RBP8.92□□□□□ -0.98
TDP1-210ENST00000554976 MAGEE1Q9HCI5 957 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 SPHK2Q9NRA0 654 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 OXSMQ9NWU1 459 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 PLK2Q9NYY3 685 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 TXNDC16Q9P2K2 825 aa8.92□□□□□ -0.98
TDP1-210ENST00000554976 CORO1CQ9ULV4 474 aaPredicted RBP8.92□□□□□ -0.98
TDP1-210ENST00000554976 WASH3PC4AMC7 463 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 PHGDHO43175 533 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 SOCS5O75159 536 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 FCARP24071 287 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CRABP2P29373 138 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 HNRNPH1P31943 449 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 CA5AP35218 305 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 MAGEA10P43363 369 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 RPL26P61254 145 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 ACTN3Q08043 901 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 OVGP1Q12889 678 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ILF2Q12905 390 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 THOC5Q13769 683 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 TECRLQ5HYJ1 363 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 LRRC8EQ6NSJ5 796 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 PTAR1Q7Z6K3 402 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 NUDCD3Q8IVD9 361 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 KCTD4Q8WVF5 259 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 LPGAT1Q92604 370 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 IRF7Q92985 503 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CEP44Q9C0F1 390 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 LINC00597Q9H2U6 94 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 POPDC3Q9HBV1 291 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 POLR3BQ9NW08 1133 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 RPL26L1Q9UNX3 145 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 USH1CQ9Y6N9 552 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ANKRD65E5RJM6 399 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CD3EAPO15446 510 aaKnown RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 XYLBO75191 536 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CRTAMO95727 393 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 CD9P21926 228 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 STK19P49842 368 aaPredicted RBP8.91□□□□□ -0.98
TDP1-210ENST00000554976 RHOAP61586 193 aa8.91□□□□□ -0.98
TDP1-210ENST00000554976 ARHGAP15Q53QZ3 475 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms