RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 UMODL1-AS1Q8N2C9 162 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 FBXO32Q969P5 355 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 EME1Q96AY2 570 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 NMD3Q96D46 503 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 BTBD9Q96Q07 612 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 MEAF6Q9HAF1 191 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SCN10AQ9Y5Y9 1956 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 NLRC5Q86WI3 1866 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 UBXN8O00124 270 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 RAMP2O60895 175 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 GOT2P00505 430 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SLC2A3P11169 496 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 RHOQP17081 205 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 HTR7P34969 479 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 STX5Q13190 355 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 PFKFB4Q16877 469 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 GLB1LQ6UWU2 654 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 ISCA2Q86U28 154 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 RASAL3Q86YV0 1011 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 PTGR2Q8N8N7 351 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 GABPB2Q8TAK5 448 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 LRTOMTQ8WZ04 291 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 LPGAT1Q92604 370 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 CCDC126Q96EE4 140 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 NSUN5Q96P11 429 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 KCNA7Q96RP8 456 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SEPT5Q99719 369 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 Q9H521 79 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 PCDHB8Q9UN66 801 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SNX13Q9Y5W8 968 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 PRORSD1PA6NEY8 169 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 MUSKO15146 869 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 CYBAP13498 195 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 DNAJB1P25685 340 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 AMIGO2Q86SJ2 522 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 DDIASQ8IXT1 998 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 SLC39A13Q96H72 371 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 EXOC2Q96KP1 924 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 UBXN10Q96LJ8 280 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 PRDM5Q9NQX1 630 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 VPS28Q9UK41 221 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 SCML2Q9UQR0 700 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 PTPRDP23468 1912 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 NR5A2O00482 541 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 SNRPB2P08579 225 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 SEMA3AQ14563 771 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 ZNF235Q14590 738 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 ZNF678Q5SXM1 525 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 PPWD1Q96BP3 646 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 LRCH3Q96II8 777 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 SMIM14Q96QK8 99 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 PRPF18Q99633 342 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 ARNT2Q9HBZ2 717 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 MID1IP1Q9NPA3 183 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 MARCH2Q9P0N8 246 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 FAM50BQ9Y247 325 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 LZTS1Q9Y250 596 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 BTRCQ9Y297 605 aa15.71■□□□□ 0.11
ARHGEF40-203ENST00000554514 LDB2O43679 373 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 GLP2RO95838 553 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 TYMPP19971 482 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 NDST2P52849 883 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 FOXA1P55317 472 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 TRIM25Q14258 630 aaKnown RBP15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 GRM2Q14416 872 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 UNC50Q53HI1 259 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 MFSD14CQ5VZR4 134 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC22A9Q8IVM8 553 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 DCP1BQ8IZD4 617 aaKnown RBP15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 ATP6V0D2Q8N8Y2 350 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 ARRDC2Q8TBH0 407 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAR2Q96K12 515 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 C1orf74Q96LT6 269 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 UROC1Q96N76 676 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 SH3GL3Q99963 347 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 TRIM8Q9BZR9 551 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 GRIP2Q9C0E4 1043 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 MFSD1Q9H3U5 465 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 ATP13A1Q9HD20 1204 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 TMEM248Q9NWD8 314 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 AP4S1Q9Y587 144 aa15.71■□□□□ 0.1
ARHGEF40-203ENST00000554514 PRSS51A0A1B0GVH4 220 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CCDC162PA2VCL2 907 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 NCF1BA6NI72 391 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 NCF1CA8MVU1 366 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CD3EAPO15446 510 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC7A4O43246 635 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 ATXN1LP0C7T5 689 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 NCF1P14598 390 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 IMPDH1P20839 514 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CCND3P30281 292 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC7A2P52569 658 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 TAF10Q12962 218 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 LRP8Q14114 963 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 RFTN1Q14699 578 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CYTH1Q15438 398 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 MGAT5BQ3V5L5 792 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CTXN3Q4LDR2 81 aa15.7■□□□□ 0.1
ARHGEF40-203ENST00000554514 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms