RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SDR16C5Q8N3Y7 309 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 PGBD5Q8N414 524 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 PAF1Q8N7H5 531 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 KCTD6Q8NC69 237 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 ATL2Q8NHH9 583 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 PCDH19Q8TAB3 1148 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 MAML1Q92585 1016 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 TSGA13Q96PP4 275 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 CHP1Q99653 195 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 CCDC86Q9H6F5 360 aaKnown RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 SPASTQ9UBP0 616 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 APOBEC3BQ9UH17 382 aaKnown RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 KLF15Q9UIH9 416 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 SALL4Q9UJQ4 1053 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 RP1P56715 2156 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 AKR1B15C9JRZ8 316 aaPredicted RBP10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 K7ESM1 405 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 PSMD11O00231 422 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 MATN3O15232 486 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 FFAR2O15552 330 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 LZTS3O60299 673 aaPredicted RBP10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 CPP00450 1065 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 HOXC4P09017 264 aaPredicted RBP10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 MX2P20592 715 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 CES1P23141 567 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 CCNCP24863 283 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 HTR1BP28222 390 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 TAS2R40P59535 323 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 PPARDQ03181 441 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 NFATC4Q14934 902 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 IFI16Q16666 785 aaKnown RBP10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 ATP13A4Q4VNC1 1196 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 HES3Q5TGS1 186 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 LRRC38Q5VT99 294 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 LIPIQ6XZB0 460 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 KDM7AQ6ZMT4 941 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 PHACTR4Q8IZ21 702 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 FSTL5Q8N475 847 aaPredicted RBP10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 SLC35G2Q8TBE7 412 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 APOLD1Q96LR9 279 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 NSMCE3Q96MG7 304 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 APOOQ9BUR5 198 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 LRRC61Q9BV99 259 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 SLC13A1Q9BZW2 595 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 POLR1EQ9GZS1 481 aaKnown RBP10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 NOD2Q9HC29 1040 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 SPTLC3Q9NUV7 552 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 PHTF1Q9UMS5 762 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 COQ6Q9Y2Z9 468 aa10.45□□□□□ -0.74
PTCD2P1-201ENST00000554393 COL27A1Q8IZC6 1860 aaPredicted RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 LY6G6EA0A0G2JKS1 128 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 TRABD2BA6NFA1 517 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 LMO7DNF2Z398 122 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 NEBLO76041 1014 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 RECQL5O94762 991 aaPredicted RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 RASGRP1O95267 797 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 PGLSO95336 258 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 PRKCGP05129 697 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 KRT10P13645 584 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 JUPP14923 745 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 KDELR1P24390 212 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 VIPR1P32241 457 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 GJC1P36383 396 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 TRIM23P36406 574 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 SLC1A1P43005 524 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 HK3P52790 923 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 HADHBP55084 474 aaKnown RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 KIAA1024LP59773 190 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 INSM1Q01101 510 aaPredicted RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 TRAF2Q12933 501 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 INPP5AQ14642 412 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 MESDQ14696 234 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 SOWAHCQ53LP3 525 aaPredicted RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 ARMC12Q5T9G4 340 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 ESRP1Q6NXG1 681 aaKnown RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 LVRNQ6Q4G3 990 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 USP45Q70EL2 814 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 CPNE8Q86YQ8 564 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 PQLC3Q8N755 202 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 DCBLD1Q8N8Z6 715 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 LMX1AQ8TE12 382 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 GLMNQ92990 594 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 HDAC11Q96DB2 347 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 NXPE2Q96DL1 559 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 SCRN2Q96FV2 425 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 COQ10AQ96MF6 247 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 WDR92Q96MX6 357 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 RNF157Q96PX1 679 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 MCCC1Q96RQ3 725 aaPredicted RBP10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 IL12RB2Q99665 862 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 BOCQ9BWV1 1114 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 B4GALT6Q9UBX8 382 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 PPIL1Q9Y3C6 166 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 PCDHGC4Q9Y5F7 938 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 U3KQA8 63 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
PTCD2P1-201ENST00000554393 TENM4Q6N022 2769 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms