RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 USP45Q70EL2 814 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 MTERF4Q7Z6M4 381 aaKnown RBP13.11□□□□□ -0.31
SHMT2-211ENST00000554310 RFX6Q8HWS3 928 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 SLC25A45Q8N413 288 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 ZNF548Q8NEK5 533 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-211ENST00000554310 BTN2A2Q8WVV5 523 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 ANKRD7Q92527 254 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-211ENST00000554310 TBATAQ96M53 351 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 LGMNQ99538 433 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 BRD8Q9H0E9 1235 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 NLGN3Q9NZ94 848 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHMT2-211ENST00000554310 TTLL3Q9Y4R7 772 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 RAI2Q9Y5P3 530 aa13.11□□□□□ -0.31
SHMT2-211ENST00000554310 KMT2BQ9UMN6 2715 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 BTNL10A8MVZ5 291 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 SIGLEC6O43699 453 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 FZD6O60353 706 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 RFPL3O75679 317 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 RECQL5O94762 991 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 HEXIM1O94992 359 aaKnown RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 C1SP09871 688 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 HTR1BP28222 390 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 CDKN2BP42772 138 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 ACADVLP49748 655 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 DYNLT1P63172 113 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 SEMG2Q02383 582 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 DSC2Q02487 901 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 EIF2B5Q13144 721 aaKnown RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 ILKQ13418 452 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TFDP2Q14188 446 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 NFATC4Q14934 902 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 CNGA3Q16281 694 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TAZQ16635 292 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 ZNF542PQ5EBM4 170 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TFDP3Q5H9I0 405 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 SPOCD1Q6ZMY3 1216 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 PHACTR4Q8IZ21 702 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 GALNT15Q8N3T1 639 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 ATL2Q8NHH9 583 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 SCRN2Q96FV2 425 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 RBM41Q96IZ5 413 aaKnown RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 IL12RB2Q99665 862 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TDRD1Q9BXT4 1180 aaKnown RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 UCKL1Q9NWZ5 548 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 KCTD5Q9NXV2 234 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 DNPEPQ9ULA0 475 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 TFR2Q9UP52 801 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 CSNK1G3Q9Y6M4 447 aa13.1□□□□□ -0.31
SHMT2-211ENST00000554310 ANKRD11Q6UB99 2663 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-211ENST00000554310 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 NPIPB15A6NHN6 443 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-211ENST00000554310 KCNK1O00180 336 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 TRIM38O00635 465 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 SCAMP1O15126 338 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 FFAR2O15552 330 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 PCCBP05166 539 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 JUNDP17535 347 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 CKMT2P17540 419 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 TGM2P21980 687 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 LHCGRP22888 699 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 NR2C2P49116 596 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 BLKP51451 505 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 VAV2P52735 878 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 KIAA1024LP59773 190 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 RPL26P61254 145 aaKnown RBP13.09□□□□□ -0.31
SHMT2-211ENST00000554310 AP1B1Q10567 949 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 ARHGEF7Q14155 803 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 ACOX1Q15067 660 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 ESRP1Q6NXG1 681 aaKnown RBP13.09□□□□□ -0.31
SHMT2-211ENST00000554310 UNQ6494/PRO21346Q6UXR6 183 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 BZW1Q7L1Q6 419 aaKnown RBP13.09□□□□□ -0.31
SHMT2-211ENST00000554310 TMPRSS7Q7RTY8 843 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 ARRDC2Q8TBH0 407 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 PIH1D2Q8WWB5 315 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 GATA6Q92908 595 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 NUS1Q96E22 293 aa13.09□□□□□ -0.31
SHMT2-211ENST00000554310 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms