RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PIGHQ14442 188 aaPredicted RBP18.82■□□□□ 0.6
CPSF2-203ENST00000554290 PNCKQ6P2M8 343 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 TAF8Q7Z7C8 310 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 TP53INP2Q8IXH6 220 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 FAM46DQ8NEK8 389 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 NSMCE1Q8WV22 266 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 OR1E3Q8WZA6 343 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 HSPH1Q92598 858 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 LIN37Q96GY3 246 aaPredicted RBP18.82■□□□□ 0.6
CPSF2-203ENST00000554290 WDR26Q9H7D7 661 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 CPNE5Q9HCH3 593 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 BPTFQ12830 3046 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 D6RAR5 112 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 CASC3O15234 703 aaKnown RBP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 RPLP0P05388 317 aaKnown RBP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 ITGA2BP08514 1039 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 AMPD1P23109 780 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 IL1R2P27930 398 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 PDX1P52945 283 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 VAC14Q08AM6 782 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 NR1I3Q14994 352 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 TSR1Q2NL82 804 aaKnown RBP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 SMTNL2Q2TAL5 461 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 TDRD12Q587J7 1177 aaKnown RBP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 FIGNQ5HY92 759 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 ARHGAP40Q5TG30 622 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 OGFOD3Q6PK18 319 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 NYAP1Q6ZVC0 841 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 CLEC14AQ86T13 490 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 GPR156Q8NFN8 814 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 PDCD6IPQ8WUM4 868 aaKnown RBP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 TMEM74Q96NL1 305 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 NUDCD1Q96RS6 583 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 EPB41L5Q9HCM4 733 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 FGF22Q9HCT0 170 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 B4GALT6Q9UBX8 382 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 RABGEF1Q9UJ41 708 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 MOSPD1Q9UJG1 213 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 PCDHGC4Q9Y5F7 938 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 BZW2Q9Y6E2 419 aaKnown RBP18.81■□□□□ 0.6
CPSF2-203ENST00000554290 PTPRQQ9UMZ3 2332 aa18.81■□□□□ 0.6
CPSF2-203ENST00000554290 PLD2O14939 933 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 HTRA2O43464 458 aaPredicted RBP18.8■□□□□ 0.6
CPSF2-203ENST00000554290 CPP00450 1065 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 GLB1P16278 677 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 SERPINB6P35237 376 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 INHBCP55103 352 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 SKOR1P84550 965 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 TAF1BQ53T94 588 aaPredicted RBP18.8■□□□□ 0.6
CPSF2-203ENST00000554290 RALGPS1Q5JS13 557 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 KCTD16Q68DU8 428 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
CPSF2-203ENST00000554290 RAB11FIP2Q7L804 512 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 CCNJLQ8IV13 435 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 TEKT4Q8WW24 435 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 NUS1Q96E22 293 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 COQ10AQ96MF6 247 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 CSPG4P5Q96PW8 444 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.8■□□□□ 0.6
CPSF2-203ENST00000554290 TMEM168Q9H0V1 697 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 LRRN3Q9H3W5 708 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 DPEP2Q9H4A9 486 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 CYP4F12Q9HCS2 524 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 MRPL40Q9NQ50 206 aaKnown RBP18.8■□□□□ 0.6
CPSF2-203ENST00000554290 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.8■□□□□ 0.6
CPSF2-203ENST00000554290 APPL1Q9UKG1 709 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 SSUH2Q9Y2M2 353 aa18.8■□□□□ 0.6
CPSF2-203ENST00000554290 SHROOM3Q8TF72 1996 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 A0A1W2PQM1 296 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 TTC24A2A3L6 582 aaPredicted RBP18.79■□□□□ 0.6
CPSF2-203ENST00000554290 PMS2P1A4D2B8 440 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 CAPN8A6NHC0 703 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 MAFKO60675 156 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 RARAP10276 462 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 MYCLP1P12525 358 aaPredicted RBP18.79■□□□□ 0.6
CPSF2-203ENST00000554290 PNLIPP16233 465 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 GM2AP17900 193 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 VIPR1P32241 457 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 CDH6P55285 790 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 TPM4P67936 248 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 CERCAMQ5T4B2 595 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 MARC1Q5VT66 337 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 B3GNT8Q7Z7M8 397 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 FBXO39Q8N4B4 442 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 SYN2Q92777 582 aaPredicted RBP18.79■□□□□ 0.6
CPSF2-203ENST00000554290 WBP1Q96G27 269 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 NSMCE3Q96MG7 304 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 MGME1Q9BQP7 344 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 LGR4Q9BXB1 951 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 NOD2Q9HC29 1040 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 PHPT1Q9NRX4 125 aaPredicted RBP18.79■□□□□ 0.6
CPSF2-203ENST00000554290 ETNK2Q9NVF9 386 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 IP6K2Q9UHH9 426 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 PHTF1Q9UMS5 762 aa18.79■□□□□ 0.6
CPSF2-203ENST00000554290 COL27A1Q8IZC6 1860 aaPredicted RBP18.79■□□□□ 0.6
CPSF2-203ENST00000554290 PRSS38A1L453 326 aa18.78■□□□□ 0.6
CPSF2-203ENST00000554290 C1QL1O75973 258 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms