RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 FAM169AQ9Y6X4 670 aa6.78□□□□□ -1.32
LINC00517-202ENST00000554257 CXorf49A8MYA2 514 aaPredicted RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 UPK3BL1B0FP48 263 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 UPK3BL2E5RIL1 263 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 NDC80O14777 642 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MID1O15344 667 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TTC4O95801 387 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SHBGP04278 402 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 UGT2B4P06133 528 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TPH1P17752 444 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 GABRB3P28472 473 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 HMGCLP35914 325 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MAGEA4P43358 317 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 DCDC1P59894 354 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 CRYMQ14894 314 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 CST6Q15828 149 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PCSK7Q16549 785 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TSTD2Q5T7W7 516 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TRMT10BQ6PF06 316 aaKnown RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 BMP8AQ7Z5Y6 402 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 GPR150Q8NGU9 434 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 EBF2Q9HAK2 575 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 CNOT6Q9ULM6 557 aaKnown RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ITM2BQ9Y287 266 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SGTAO43765 313 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ADH1BP00325 375 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 EPHX1P07099 455 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TUBBP07437 444 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PGAM1P18669 254 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 C5AR1P21730 350 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SERPINA4P29622 427 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 FOXN2P32314 431 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SUOXP51687 545 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ADPRHP54922 357 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 BCL2L1Q07817 233 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 DMWDQ09019 674 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MTAPQ13126 283 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MTM1Q13496 603 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 EFTUD2Q15029 972 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PCID2Q5JVF3 399 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 HENMT1Q5T8I9 393 aaKnown RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SERPINA13PQ6UXR4 307 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 USP30Q70CQ3 517 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 LYSMD3Q7Z3D4 306 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 HSD11B1LQ7Z5J1 315 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 IFT81Q8WYA0 676 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MFSD3Q96ES6 412 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TMEM109Q9BVC6 243 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 LMAN1LQ9HAT1 526 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ITM2CQ9NQX7 267 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 FETUBQ9UGM5 382 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 FZD4Q9ULV1 537 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PLA2G4CQ9UP65 541 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PCDHB9Q9Y5E1 797 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 IGLV3-16A0A075B6K0 115 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 A0A1W2PQ67 120 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PRR19A6NJB7 356 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SDR42E2A6NKP2 422 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PRNPP04156 253 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 GSTA2P09210 222 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 HOXB2P14652 356 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 AOC1P19801 751 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ADRA1DP25100 572 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MAGEA12P43365 314 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ARL4CP56559 192 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 PRPSAP1Q14558 356 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TYSND1Q2T9J0 566 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ANKRD20A4Q4UJ75 823 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SETMARQ53H47 684 aaPredicted RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ARMC12Q5T9G4 340 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 LIPIQ6XZB0 460 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TRMT11Q7Z4G4 463 aaKnown RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MMAAQ8IVH4 418 aaKnown RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TMEM105Q8N8V8 129 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TP53I13Q8NBR0 393 aaPredicted RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 NSMCE1Q8WV22 266 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 OR8D1Q8WZ84 308 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 ISL2Q96A47 359 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
LINC00517-202ENST00000554257 SH3GL2Q99962 352 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 MED16Q9Y2X0 877 aa6.77□□□□□ -1.33
LINC00517-202ENST00000554257 TCRBV9S1A1TA0A576 114 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 FAM170BA6NMN3 283 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 SLC7A4O43246 635 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 BPIP17213 487 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 VIPR1P32241 457 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 WASP42768 502 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 PMS2P54278 862 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 PDIA2Q13087 525 aaKnown RBP6.76□□□□□ -1.33
LINC00517-202ENST00000554257 LRRC32Q14392 662 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 MAP7D1Q3KQU3 841 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 LRRC66Q68CR7 880 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 KIAA0930Q6ICG6 404 aaPredicted RBP6.76□□□□□ -1.33
LINC00517-202ENST00000554257 ESRP1Q6NXG1 681 aaKnown RBP6.76□□□□□ -1.33
LINC00517-202ENST00000554257 ERN2Q76MJ5 926 aaKnown RBP6.76□□□□□ -1.33
LINC00517-202ENST00000554257 TRMT10CQ7L0Y3 403 aaKnown RBP6.76□□□□□ -1.33
LINC00517-202ENST00000554257 CYP2U1Q7Z449 544 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 BBS5Q8N3I7 341 aa6.76□□□□□ -1.33
LINC00517-202ENST00000554257 GPR26Q8NDV2 337 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms