RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 RUNX2Q13950 521 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 DUSP6Q16828 381 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 PLEKHO1Q53GL0 409 aaPredicted RBP5.4□□□□□ -1.54
FOXN3-206ENST00000554005 SNX30Q5VWJ9 437 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 LRRC8EQ6NSJ5 796 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 CDC73Q6P1J9 531 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 PARM1Q6UWI2 310 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 C4orf50Q6ZRC1 276 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 FAM43BQ6ZT52 329 aaPredicted RBP5.4□□□□□ -1.54
FOXN3-206ENST00000554005 PXKQ7Z7A4 578 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 ZNF575Q86XF7 245 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 DENND6AQ8IWF6 608 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 DHX40Q8IX18 779 aaKnown RBP5.4□□□□□ -1.54
FOXN3-206ENST00000554005 RBFAQ8N0V3 343 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 TMEM18Q96B42 140 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 CDK19Q9BWU1 502 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 NPFFR1Q9GZQ6 430 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 CDT1Q9H211 546 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 KRT84Q9NSB2 600 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 SIRT3Q9NTG7 399 aaPredicted RBP5.4□□□□□ -1.54
FOXN3-206ENST00000554005 MAP3K20Q9NYL2 800 aaKnown RBP5.4□□□□□ -1.54
FOXN3-206ENST00000554005 ELOVL5Q9NYP7 299 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 NCKIPSDQ9NZQ3 722 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 CARD8Q9Y2G2 431 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 PSAT1Q9Y617 370 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 SCINQ9Y6U3 715 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 CAPN7Q9Y6W3 813 aa5.4□□□□□ -1.54
FOXN3-206ENST00000554005 KIF1AQ12756 1690 aa5.4□□□□□ -1.55
FOXN3-206ENST00000554005 PHLPP1O60346 1717 aa5.4□□□□□ -1.55
FOXN3-206ENST00000554005 A0A0U1RQF3 1178 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 TYW5A2RUC4 315 aaKnown RBP5.39□□□□□ -1.55
FOXN3-206ENST00000554005 KLRF2D3W0D1 207 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 NPIPB11E5RHQ5 1161 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 SNAP23O00161 211 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 ATP2C2O75185 946 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 SPARCP09486 303 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 IRF1P10914 325 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 PCNAP12004 261 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 PTMSP20962 102 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
FOXN3-206ENST00000554005 RASSF2P50749 326 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 HDAC4P56524 1084 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 FAM27E3Q08E93 113 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 LAMB3Q13751 1172 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 CAPSQ13938 189 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 LPIN1Q14693 890 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 PTGR1Q14914 329 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 GSTA3Q16772 222 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 HIST2H2ACQ16777 129 aaPredicted RBP5.39□□□□□ -1.55
FOXN3-206ENST00000554005 C11orf87Q6NUJ2 197 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 NEK10Q6ZWH5 1172 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 ADSSL1Q8N142 457 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 TMEM199Q8N511 208 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 NGEFQ8N5V2 710 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 GJC3Q8NFK1 279 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 SLC35F5Q8WV83 523 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 LPAR1Q92633 364 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 SLC25A28Q96A46 364 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 NLRP4Q96MN2 994 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 BBS4Q96RK4 519 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 H2AFJQ9BTM1 129 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 FOXP1Q9H334 677 aaPredicted RBP5.39□□□□□ -1.55
FOXN3-206ENST00000554005 NDRG3Q9UGV2 375 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 INTS6Q9UL03 887 aaKnown RBP5.39□□□□□ -1.55
FOXN3-206ENST00000554005 MKLN1Q9UL63 735 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 RAI2Q9Y5P3 530 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 MSH6P52701 1360 aa5.39□□□□□ -1.55
FOXN3-206ENST00000554005 MED1Q15648 1581 aaPredicted RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 MYOM1P52179 1685 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 ITSN1Q15811 1721 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 SOCS2O14508 198 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 MOSPD3O75425 235 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 CCNDBP1O95273 360 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 TFP02787 698 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 PTMAP06454 111 aaKnown RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 TMEM191BP0C7N4 346 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 LAMP2P13473 410 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 CASP2P42575 452 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 GABRB2P47870 512 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 RARSP54136 660 aaKnown RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 OLR1P78380 273 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 TMEM115Q12893 351 aaPredicted RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 GRIK3Q13003 919 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 PPP2R5BQ15173 497 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 ESCO2Q56NI9 601 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 WASHC2DQ5SRD0 308 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 CES5AQ6NT32 575 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 TDRPQ86YL5 185 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 TEX45Q8NA69 505 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 GABPB2Q8TAK5 448 aaPredicted RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 INTS12Q96CB8 462 aaKnown RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 PABPC5Q96DU9 382 aaKnown RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 ZC3HAV1LQ96H79 300 aaKnown RBP5.38□□□□□ -1.55
FOXN3-206ENST00000554005 ZNF778Q96MU6 729 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 MSTO1Q9BUK6 570 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 ITPAQ9BY32 194 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 ISCUQ9H1K1 167 aa5.38□□□□□ -1.55
FOXN3-206ENST00000554005 PLEKHA4Q9H4M7 779 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms