RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 CDKAL1Q5VV42 579 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 BBS5Q8N3I7 341 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 NSMCE1Q8WV22 266 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 OR1E3Q8WZA6 343 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 TTC9Q92623 222 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 TMEM159Q96B96 161 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 NUS1Q96E22 293 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 SGF29Q96ES7 293 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 RBM15Q96T37 977 aaKnown RBP eCLIP9.95□□□□□ -0.82
ACTN1-210ENST00000553779 CMKLR1Q99788 373 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 SEMA4CQ9C0C4 833 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 CLMPQ9H6B4 373 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 CARS2Q9HA77 564 aaKnown RBP9.95□□□□□ -0.82
ACTN1-210ENST00000553779 PHPT1Q9NRX4 125 aaPredicted RBP9.95□□□□□ -0.82
ACTN1-210ENST00000553779 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 FANCLQ9NW38 375 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 SEPT3Q9UH03 358 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 PCSK1NQ9UHG2 260 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 PCDHGA7Q9Y5G6 932 aa9.95□□□□□ -0.82
ACTN1-210ENST00000553779 WASH4PA8MWX3 477 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 EIF3CLB5ME19 914 aaKnown RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 NTN3O00634 580 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 CASC3O15234 703 aaKnown RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 CPP00450 1065 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 KRT10P13645 584 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 CCKBRP32239 447 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 AP1S1P61966 158 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 MYL5Q02045 173 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 KCNC4Q03721 635 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 PEX6Q13608 980 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 RFTN1Q14699 578 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 STX1AQ16623 288 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 CERCAMQ5T4B2 595 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 SPECC1LQ69YQ0 1117 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 ACAD10Q6JQN1 1059 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 RFX8Q6ZV50 586 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 DPPA4Q7L190 304 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 SPRED1Q7Z699 444 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 VASH2Q86V25 355 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 PLA2G15Q8NCC3 412 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 FUBP1Q96AE4 644 aaKnown RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 EIF3CQ99613 913 aaKnown RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 GSDMCQ9BYG8 508 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 ZWILCHQ9H900 591 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 FGF22Q9HCT0 170 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 MRPL40Q9NQ50 206 aaKnown RBP9.94□□□□□ -0.82
ACTN1-210ENST00000553779 ANO10Q9NW15 660 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 LRIT1Q9P2V4 623 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 SIK3Q9Y2K2 1263 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 DGKBQ9Y6T7 804 aa9.94□□□□□ -0.82
ACTN1-210ENST00000553779 ZNF106Q9H2Y7 1883 aaKnown RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 PRAMEF33A0A0G2JMD5 474 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 A0A1W2PQM1 296 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 PRSS38A1L453 326 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 TMEM202A6NGA9 273 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 GOLGA6L22H0YM25 854 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 H3BRJ5 948 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 EFSO43281 561 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 BUB1BO60566 1050 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 PRAMEF10O60809 474 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 CYP2A6P11509 494 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 MYCLP1P12525 358 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ITIH1P19827 911 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ALDH4A1P30038 563 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ARL4AP40617 200 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 NOP2P46087 812 aaKnown RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 GNPDA1P46926 289 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ATP1A2P50993 1020 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 SKOR1P84550 965 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 TGIF1Q15583 401 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ASIC2Q16515 512 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ERMARDQ5T6L9 678 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 RAET1GQ6H3X3 334 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 DOK6Q6PKX4 331 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 SLC30A9Q6PML9 568 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 PIM3Q86V86 326 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 HEATR4Q86WZ0 1026 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ZSWIM9Q86XI8 627 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 MCOLN2Q8IZK6 566 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ATPAF2Q8N5M1 289 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 SNRNP27Q8WVK2 155 aaKnown RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 EXTL1Q92935 676 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 ZNF653Q96CK0 615 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 KCTD15Q96SI1 283 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 SNRNP25Q9BV90 132 aaKnown RBP9.93□□□□□ -0.82
ACTN1-210ENST00000553779 SLC39A8Q9C0K1 460 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 TMEM168Q9H0V1 697 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 LRRC19Q9H756 370 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 PDFQ9HBH1 243 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 B4GALT6Q9UBX8 382 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 SCINQ9Y6U3 715 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 RNF215Q9Y6U7 377 aa9.93□□□□□ -0.82
ACTN1-210ENST00000553779 LRRK2Q5S007 2527 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms