RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CHRNDQ07001 517 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 MMEL1Q495T6 779 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 ZNF667Q5HYK9 610 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 CEP85LQ5SZL2 805 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 FAM72AQ5TYM5 149 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 ATG16L1Q676U5 607 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 FAM72DQ6L9T8 149 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 ADAM5Q6NVV9 412 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 B3GNT6Q6ZMB0 384 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 FAM72BQ86X60 149 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 TMTC1Q8IUR5 882 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 NKAPQ8N5F7 415 aaKnown RBP3.97□□□□□ -1.77
SCFD1-210ENST00000553693 BEST2Q8NFU1 509 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 TMEM255BQ8WV15 326 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 WBP1Q96G27 269 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 BBS4Q96RK4 519 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 PCDH9Q9HC56 1237 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 CNGB3Q9NQW8 809 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 ABCF3Q9NUQ8 709 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 MCM9Q9NXL9 1143 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 C1RLQ9NZP8 487 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 POU2F3Q9UKI9 436 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 LAMC3Q9Y6N6 1575 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 A0A1W2PS18 150 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 GOLGA6L9A6NEM1 432 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 C16orf97H3BN30 126 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 NBNO60934 754 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 LDHAP00338 332 aaKnown RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 MMP2P08253 660 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 CLCNKAP51800 687 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 BRWD1-AS2P59051 145 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 EFNB1P98172 346 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 FOXD4Q12950 439 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 DMP1Q13316 513 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 HIST2H2ACQ16777 129 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 TCTN1Q2MV58 587 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 PAPPA-AS1Q5QFB9 102 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 IRAK1BP1Q5VVH5 260 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 LRRC8EQ6NSJ5 796 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 FBXL22Q6P050 247 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 ZNF449Q6P9G9 518 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 BBS12Q6ZW61 710 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 IL17RCQ8NAC3 791 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 SPATA22Q8NHS9 363 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 RUFY2Q8WXA3 655 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 USP13Q92995 863 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 ZSCAN31Q96LW9 406 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 RPS6KC1Q96S38 1066 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 POLR3GLQ9BT43 218 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 TCF19Q9Y242 345 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 ADAM18Q9Y3Q7 739 aa3.96□□□□□ -1.78
SCFD1-210ENST00000553693 BAZ1BQ9UIG0 1483 aaKnown RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 BAZ1AQ9NRL2 1556 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-210ENST00000553693 TEX22C9J3V5 150 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 ZNF587BE7ETH6 402 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 BCAT2O15382 392 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 MT-CYBP00156 380 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 HEXAP06865 529 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 IRF1P10914 325 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 DDX5P17844 614 aaKnown RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 RRM1P23921 792 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 PSMC2P35998 433 aaKnown RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 USP8P40818 1118 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 FUT6P51993 359 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 UBE3AQ05086 875 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 BIRC2Q13490 618 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 KRT24Q2M2I5 525 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 GRAMD1BQ3KR37 738 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 MTSS1LQ765P7 747 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 LINGO2Q7L985 606 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 RRM2BQ7LG56 351 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 METTL27Q8N6F8 245 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 KBTBD3Q8NAB2 608 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 OR13A1Q8NGR1 328 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 LRRC8CQ8TDW0 803 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 TTC14Q96N46 770 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 DUX3Q96PT4 197 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 HAUS8Q9BT25 410 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 PHF7Q9BWX1 381 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 INTS2Q9H0H0 1204 aaKnown RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 ZNF334Q9HCZ1 680 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 BPIFA1Q9NP55 256 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 BEX4Q9NWD9 120 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 HCN3Q9P1Z3 774 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 CTNNAL1Q9UBT7 734 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 CNOT7Q9UIV1 285 aaKnown RBP3.95□□□□□ -1.78
SCFD1-210ENST00000553693 RCOR1Q9UKL0 485 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 KCNS2Q9ULS6 477 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 AMDHD2Q9Y303 409 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 FAM96BQ9Y3D0 163 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 PCDHGB3Q9Y5G1 929 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 PSAT1Q9Y617 370 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 SMARCA4P51532 1647 aa3.95□□□□□ -1.78
SCFD1-210ENST00000553693 MRC2Q9UBG0 1479 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 SLC22A3O75751 556 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 GALTP07902 379 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 GM2AP17900 193 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 EDN2P20800 178 aa3.94□□□□□ -1.78
SCFD1-210ENST00000553693 AGAP20933 346 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms