RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 E7ESA3 106 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 M0R296 226 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 CCL22O00626 93 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 AURKAO14965 403 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 ALDH1A2O94788 518 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 CLDN7O95471 211 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 GABRG2P18507 467 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 PGAM1P18669 254 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 NDUFV2P19404 249 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 NMBRP28336 390 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 SSTR1P30872 391 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 VIPR1P32241 457 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 P2RY2P41231 377 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 CCDC15Q0P6D6 951 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 FZD5Q13467 585 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 LAMB3Q13751 1172 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 GAS6Q14393 721 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 PTPRCAPQ14761 206 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 TAF1AQ15573 450 aaPredicted RBP9.79□□□□□ -0.84
CHD8-204ENST00000553622 KYNUQ16719 465 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 LRRC66Q68CR7 880 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 SYT13Q7L8C5 426 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 TSPAN33Q86UF1 283 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 OTUD6BQ8N6M0 293 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 MDGA1Q8NFP4 955 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 BRSK1Q8TDC3 778 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 HCAR2Q8TDS4 363 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 CAVIN3Q969G5 261 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 VOPP1Q96AW1 172 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 LRRC39Q96DD0 335 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 MRGPRX1Q96LB2 322 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 TTC25Q96NG3 672 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 WDR83Q9BRX9 315 aaKnown RBP9.79□□□□□ -0.84
CHD8-204ENST00000553622 HDAC8Q9BY41 377 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 OSBPL6Q9BZF3 934 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 PHACTR1Q9C0D0 580 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 CHRDQ9H2X0 955 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 SEMA4AQ9H3S1 761 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 MAGEE1Q9HCI5 957 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 BPIFA1Q9NP55 256 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 ARFGAP3Q9NP61 516 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 PPANQ9NQ55 473 aaKnown RBP9.79□□□□□ -0.84
CHD8-204ENST00000553622 C2orf42Q9NWW7 574 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 NINJ2Q9NZG7 142 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 SERGEFQ9UGK8 458 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 GGT7Q9UJ14 662 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 SOX13Q9UN79 622 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 NCKAP1Q9Y2A7 1128 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 PKP3Q9Y446 797 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 RPS6KL1Q9Y6S9 549 aa9.79□□□□□ -0.84
CHD8-204ENST00000553622 PLXND1Q9Y4D7 1925 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 FAM237BA0A1B0GVD1 139 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 MAGEB16A2A368 324 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 STX7O15400 261 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 LDB2O43679 373 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 PCDH8O95206 1070 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 POLBP06746 335 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 ELFN1P0C7U0 828 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 PAMP19021 973 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 LPOP22079 712 aaPredicted RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 PHBP35232 272 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 DRD3P35462 400 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 PRAMEP78395 509 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 ELP6Q0PNE2 266 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SFSWAPQ12872 951 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 MTAPQ13126 283 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 CRYMQ14894 314 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 ACOX1Q15067 660 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 ANKRD20A4Q4UJ75 823 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SPANXN3Q5MJ09 141 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 UBAP2Q5T6F2 1119 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 TSTD2Q5T7W7 516 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 PIP5KL1Q5T9C9 394 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 ALS2CLQ60I27 953 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 CWF19L1Q69YN2 538 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 CRTC1Q6UUV9 634 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 UNC5AQ6ZN44 842 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 C3orf62Q6ZUJ4 267 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 TRMT10CQ7L0Y3 403 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 DPPA4Q7L190 304 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 NLRP9Q7RTR0 991 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 CCNJLQ8IV13 435 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SPEM1Q8N4L4 309 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD8-204ENST00000553622 OR4K2Q8NGD2 314 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 OR13C4Q8NGS5 318 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 OR6P1Q8NGX9 317 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 OR14C36Q8NHC7 312 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 CXorf40AQ8TE69 158 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 PTCD2Q8WV60 388 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 CLDN23Q96B33 292 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 MFSD3Q96ES6 412 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SCRN2Q96FV2 425 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 DNAJC1Q96KC8 554 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 RANBP9Q96S59 729 aa9.78□□□□□ -0.84
CHD8-204ENST00000553622 SRPK1Q96SB4 655 aaKnown RBP9.78□□□□□ -0.84
CHD8-204ENST00000553622 NAT9Q9BTE0 207 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms