RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 MRGBPQ9NV56 204 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 INTS10Q9NVR2 710 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 PIH1D1Q9NWS0 290 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 COPG2Q9UBF2 871 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 KLF15Q9UIH9 416 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 FBXO5Q9UKT4 447 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ARHGAP26Q9UNA1 814 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ACOT9Q9Y305 439 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 PLXNA3P51805 1871 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 A0A0D9SEW6 157 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 A0A1W2PQ67 120 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 E2F8A0AVK6 867 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 WDR91A4D1P6 747 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 C2orf78A6NCI8 922 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 C2orf81A6NN90 581 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 C5orf67F2Z3F1 127 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 H0Y626 953 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 LDB2O43679 373 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 GREM1O60565 184 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 RPP40O75818 363 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 UNC5CO95185 931 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 AHSGP02765 367 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 C2P06681 752 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CKMP06732 381 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 C8AP07357 584 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 DLDP09622 509 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 LINC00271P0C7V0 271 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 BMP4P12644 408 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TCF3P15923 654 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CD33P20138 364 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CD9P21926 228 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 ARNTP27540 789 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 GABRR2P28476 465 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 BMPR1AP36894 532 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PLK1P53350 603 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 NAA20P61599 178 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 RPS24P62847 133 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PRAMEP78395 509 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PPARDQ03181 441 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 BST1Q10588 318 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CDH18Q13634 790 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 SEPT6Q14141 434 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 KRT72Q14CN4 511 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TAF1AQ15573 450 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PCSK7Q16549 785 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 FAM83EQ2M2I3 478 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 AARS2Q5JTZ9 985 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 AGAP9Q5VTM2 703 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 MBLAC2Q68D91 279 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF470Q6ECI4 717 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 FAM45BPQ6NSW5 357 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 KLC3Q6P597 504 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 RFWD3Q6PCD5 774 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CES3Q6UWW8 571 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 RAPH1Q70E73 1250 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 OTOP2Q7RTS6 562 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 UBE2Q1Q7Z7E8 422 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TMC8Q8IU68 726 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CILP2Q8IUL8 1156 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 MFN1Q8IWA4 741 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CFAP52Q8N1V2 620 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PGBD5Q8N414 524 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 FITM2Q8N6M3 262 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 MRPL43Q8N983 215 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 KLHL23Q8NBE8 558 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 KREMEN2Q8NCW0 462 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 OR6Y1Q8NGX8 325 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TTC8Q8TAM2 541 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PIWIL2Q8TC59 973 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 FAM45AQ8TCE6 357 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 PDCD6IPQ8WUM4 868 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TMEM237Q96Q45 408 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 RAB3IPQ96QF0 476 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 FEM1AQ9BSK4 669 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 SPON2Q9BUD6 331 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TDRD1Q9BXT4 1180 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 LRRC3Q9BY71 257 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 NPHS2Q9NP85 383 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 ASAH2Q9NR71 780 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 GKN1Q9NS71 199 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 KIAA1522Q9P206 1035 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 DNMT3BQ9UBC3 853 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 APOBEC2Q9Y235 224 aaKnown RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-221ENST00000553498 SH3BP1Q9Y3L3 701 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 CPQQ9Y646 472 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 COMMD10Q9Y6G5 202 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 SLC4A7Q9Y6M7 1214 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 NLRC5Q86WI3 1866 aa7.34□□□□□ -1.23
ATXN3-221ENST00000553498 TDRD15B5MCY1 1934 aaKnown RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 FAM95CA0A1B0GW59 222 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 H7C0S8 307 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 CBX4O00257 560 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms