RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 CCDC3Q9BQI4 270 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 NUP85Q9BW27 656 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 CINPQ9BW66 212 aaPredicted RBP10.59□□□□□ -0.71
DDX23-217ENST00000553065 TMEM168Q9H0V1 697 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 POLR1BQ9H9Y6 1135 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 SP110Q9HB58 689 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 MRPL47Q9HD33 250 aaKnown RBP10.59□□□□□ -0.71
DDX23-217ENST00000553065 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.59□□□□□ -0.71
DDX23-217ENST00000553065 IFNKQ9P0W0 207 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 SCINQ9Y6U3 715 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 SHROOM3Q8TF72 1996 aa10.59□□□□□ -0.71
DDX23-217ENST00000553065 ARHGEF17Q96PE2 2063 aaPredicted RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 CDRT15L2A8MXV6 281 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 B4GAT1O43505 415 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 HEXIM1O94992 359 aaKnown RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 MAP3K6O95382 1288 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 SOD1P00441 154 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 PRB1P04280 392 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 CEACAM5P06731 702 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 ANXA6P08133 673 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 SERPINA4P29622 427 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 ZNF135P52742 658 aaPredicted RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 GABREP78334 506 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 DPYSL3Q14195 570 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 PIGHQ14442 188 aaPredicted RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 CCDC122Q5T0U0 273 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 TMCO4Q5TGY1 634 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 ESRP1Q6NXG1 681 aaKnown RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 ALKBH5Q6P6C2 394 aaKnown RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 LVRNQ6Q4G3 990 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 IGF2-ASQ6U949 168 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 Q6ZVL8 140 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 C17orf82Q86X59 251 aaPredicted RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 ARRDC2Q8TBH0 407 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 NAF1Q96HR8 494 aaKnown RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 WDR92Q96MX6 357 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 DEPDC7Q96QD5 511 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.58□□□□□ -0.72
DDX23-217ENST00000553065 SLC13A1Q9BZW2 595 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 ABCG4Q9H172 646 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 SPATS2LQ9NUQ6 558 aaKnown RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 DONSONQ9NYP3 566 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 SIRPGQ9P1W8 387 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 GULP1Q9UBP9 304 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 SEPT3Q9UH03 358 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 SATB2Q9UPW6 733 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 PLEKHM1Q9Y4G2 1056 aa10.58□□□□□ -0.72
DDX23-217ENST00000553065 PCYT1BQ9Y5K3 369 aaPredicted RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
DDX23-217ENST00000553065 UNC13CQ8NB66 2214 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 NPIPB15A6NHN6 443 aaPredicted RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 H3BRJ5 948 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 RASGRP1O95267 797 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 PGLSO95336 258 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 TNFP01375 233 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 ALPIP09923 528 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 XPAP23025 273 aaPredicted RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 ACTN2P35609 894 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 ETV3P41162 512 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 ABCG1P45844 678 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 POLD2P49005 469 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 KIAA1024LP59773 190 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 AP1S1P61966 158 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 PTSQ03393 145 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 NIPAL4Q0D2K0 466 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 PAFAH1B3Q15102 231 aaKnown RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 HS1BP3Q53T59 392 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 ERAP2Q6P179 960 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 TMCO3Q6UWJ1 677 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 FSTL5Q8N475 847 aaPredicted RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 OR56A4Q8NGH8 313 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 MAML1Q92585 1016 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 CCDC74AQ96AQ1 378 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 FAF2Q96CS3 445 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 SCRN2Q96FV2 425 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 ZNF578Q96N58 590 aaPredicted RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 MCCC1Q96RQ3 725 aaPredicted RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 WDR24Q96S15 920 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 AGAP2Q99490 1192 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 CHP1Q99653 195 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 C1QTNF7Q9BXJ2 289 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 TEX101Q9BY14 249 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 XPO4Q9C0E2 1151 aaKnown RBP10.57□□□□□ -0.72
DDX23-217ENST00000553065 IP6K2Q9UHH9 426 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 ANAPC7Q9UJX3 599 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 PHTF1Q9UMS5 762 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 GPR34Q9UPC5 381 aa10.57□□□□□ -0.72
DDX23-217ENST00000553065 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 C3orf70A6NLC5 250 aaPredicted RBP10.56□□□□□ -0.72
DDX23-217ENST00000553065 TNFRSF10CO14798 259 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 MFSD11O43934 449 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 PROSCO94903 275 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 FGF1P05230 155 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 MMP2P08253 660 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 ELFN1P0C7U0 828 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CTSEP14091 401 aa10.56□□□□□ -0.72
DDX23-217ENST00000553065 CTPS1P17812 591 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms