RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 PSMD5Q16401 504 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 DDR2Q16832 855 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNB3-219ENST00000551544 TMEM259Q4ZIN3 620 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 LRTOMTQ8WZ04 291 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 SLC39A3Q9BRY0 314 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 SYT17Q9BSW7 474 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 ARNT2Q9HBZ2 717 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 UXTQ9UBK9 157 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-219ENST00000551544 GMEB1Q9Y692 573 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 GJB3O75712 270 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 PTPRCAPQ14761 206 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.32
CACNB3-219ENST00000551544 LRRC49Q8IUZ0 686 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 SLC22A9Q8IVM8 553 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 ALDH16A1Q8IZ83 802 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 LZICQ8WZA0 190 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 MPP4Q96JB8 637 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 SPAG4Q9NPE6 437 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 SUCOQ9UBS9 1254 aaKnown RBP13.08□□□□□ -0.32
CACNB3-219ENST00000551544 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 TNFAIP8O95379 198 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 S1PR4O95977 384 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 MMP2P08253 660 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 FAM58BPP0C7Q3 252 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 IMPDH1P20839 514 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 MGAT5BQ3V5L5 792 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 SIRPB2Q5JXA9 342 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 METTL25Q8N6Q8 603 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 GPR152Q8TDT2 470 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 RGS18Q9NS28 235 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 CHCHD3Q9NX63 227 aaKnown RBP13.07□□□□□ -0.32
CACNB3-219ENST00000551544 PLK2Q9NYY3 685 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
CACNB3-219ENST00000551544 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 TBX18O95935 607 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 TBX4P57082 545 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 EFEMP1Q12805 493 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 NADK2Q4G0N4 442 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 AMIGO2Q86SJ2 522 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 ISCA2Q86U28 154 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 CIR1Q86X95 450 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-219ENST00000551544 TRPV1Q8NER1 839 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 SUSD3Q96L08 255 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 C3orf30Q96M34 536 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 TBATAQ96M53 351 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 ZYG11BQ9C0D3 744 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 COQ10BQ9H8M1 238 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 IL1RL2Q9HB29 575 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 ATP13A1Q9HD20 1204 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 PTGDR2Q9Y5Y4 395 aa13.07□□□□□ -0.32
CACNB3-219ENST00000551544 FNDC1Q4ZHG4 1894 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 PPP6CO00743 305 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 VILLO15195 856 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 SLC7A4O43246 635 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 NRP2O60462 931 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF623O75123 536 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 HMBSP08397 361 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 GRK4P32298 578 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 HSPA13P48723 471 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 MGAT3Q09327 533 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 KIF19Q2TAC6 998 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 MS4A13Q5J8X5 152 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF678Q5SXM1 525 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 B3GNT6Q6ZMB0 384 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 CYHR1Q6ZMK1 362 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 MIB1Q86YT6 1006 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 BLOC1S5Q8TDH9 187 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 PTERQ96BW5 349 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 RANBP9Q96S59 729 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 SLC25A23Q9BV35 468 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 MRPL40Q9NQ50 206 aaKnown RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 VPS45Q9NRW7 570 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 GIMAP2Q9UG22 337 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 CROTQ9UKG9 612 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 LRRC14BA6NHZ5 514 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 TRIM24O15164 1050 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 SRP72O76094 671 aaKnown RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 SIX3O95343 332 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 PIRTP0C851 137 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 ZNF26P17031 533 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-219ENST00000551544 RHOQP17081 205 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 SLC7A2P52569 658 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 INHBCP55103 352 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 STX1BP61266 288 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 RHDQ02161 417 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 CYTH1Q15438 398 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 SLC14A2Q15849 920 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 UNC50Q53HI1 259 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 HERC6Q8IVU3 1022 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 AHI1Q8N157 1196 aa13.06□□□□□ -0.32
CACNB3-219ENST00000551544 PPWD1Q96BP3 646 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms