RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DDX39AO00148 427 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 PPM1DO15297 605 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SLC16A3O15427 465 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 DNPH1O43598 174 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GJB3O75712 270 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ACTL6BO94805 426 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 OAZ2O95190 189 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 PROS1P07225 676 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 RETP07949 1114 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CALM1P0DP23 149 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CALM2P0DP24 149 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CALM3P0DP25 149 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 HGFP14210 728 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 KCNE1P15382 129 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 PPP3CBP16298 524 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CEBPBP17676 345 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CD53P19397 219 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 KLRC2P26717 231 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 MST1P26927 711 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 AKT1P31749 480 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SFNP31947 248 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 MLH1P40692 756 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GLUD2P49448 558 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 PAPOLAP51003 745 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 NXPH1P58417 271 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 PSMC5P62195 406 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GUCY1B3Q02153 619 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CSHL1Q14406 222 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 RPS6KA2Q15349 733 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 TAF5Q15542 800 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 IL17AQ16552 155 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 P3H1Q32P28 736 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 TIGD2Q4W5G0 525 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 USP39Q53GS9 565 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 BMP2KLQ5H9B9 411 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 FAM78AQ5JUQ0 283 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 TEDDM1Q5T9Z0 273 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ABLIM2Q6H8Q1 611 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 JMJD6Q6NYC1 403 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 VITQ6UXI7 678 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 MMS22LQ6ZRQ5 1243 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 RINLQ6ZS11 566 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 Q6ZS52 159 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GRASPQ7Z6J2 395 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 PIP4P1Q86T03 277 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 DTX2Q86UW9 622 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 PALM2Q8IXS6 379 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 FSTL5Q8N475 847 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 OR6Y1Q8NGX8 325 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CTCFLQ8NI51 663 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 ZNF461Q8TAF7 563 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 TBCKQ8TEA7 893 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SLC25A43Q8WUT9 341 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 SMG7Q92540 1137 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 NACC2Q96BF6 587 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ELSPBP1Q96BH3 223 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 MYEOVQ96EZ4 313 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 TBATAQ96M53 351 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 WWC2-AS2Q96NR7 200 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 EIF3CQ99613 913 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 PKMYT1Q99640 499 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SDF4Q9BRK5 362 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 NUDT22Q9BRQ3 303 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 NTPCRQ9BSD7 190 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 MMTAG2Q9BU76 263 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 DPCDQ9BVM2 203 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 RNF26Q9BY78 433 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 ACTRT3Q9BYD9 372 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GCOM2Q9BZD3 368 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 TP63Q9H3D4 680 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 RWDD1Q9H446 243 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 PDZD7Q9H5P4 517 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ZNF703Q9H7S9 590 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 GLOD4Q9HC38 313 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ZNF334Q9HCZ1 680 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 SEPSECSQ9HD40 501 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 ENTPD7Q9NQZ7 604 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 HEBP1Q9NRV9 189 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 MRPL17Q9NRX2 175 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 DIAPH3Q9NSV4 1193 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SEMA4GQ9NTN9 838 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 RRN3Q9NYV6 651 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GDE1Q9NZC3 331 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 VPS54Q9P1Q0 977 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 STK39Q9UEW8 545 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 TESQ9UGI8 421 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 STEAP1Q9UHE8 339 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ADAM28Q9UKQ2 775 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 ISY1Q9ULR0 285 aaKnown RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 TBX20Q9UMR3 447 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 GINS2Q9Y248 185 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SSX2IPQ9Y2D8 614 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 SNX14Q9Y5W7 946 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 HS3ST4Q9Y661 456 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 PTPN13Q12923 2485 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 BOD1L1Q8NFC6 3051 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 UBR5O95071 2799 aaPredicted RBP2.53□□□□□ -2
CPSF6-207ENST00000551516 MYO18BQ8IUG5 2567 aa2.53□□□□□ -2.01
CPSF6-207ENST00000551516 FLNCQ14315 2725 aa2.52□□□□□ -2.01
CPSF6-207ENST00000551516 SMIM28A0A1B0GU29 152 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms