RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 SCN4AP35499 1836 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 NUP205Q92621 2012 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 A0A0J9YYE9 177 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 MSI1O43347 362 aaKnown RBP12.28□□□□□ -0.44
ERBB3-219ENST00000551242 HCRTO43612 131 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 ALBP02768 609 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 JUNBP17275 347 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-219ENST00000551242 PTPN3P26045 913 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 ALDH4A1P30038 563 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 RFC2P35250 354 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 NR4A2P43354 598 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 APLP1P51693 650 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 RAB10P61026 200 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 CSHL1Q14406 222 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 TARBP2Q15633 366 aaKnown RBP12.28□□□□□ -0.44
ERBB3-219ENST00000551242 MAPRE1Q15691 268 aaKnown RBP12.28□□□□□ -0.44
ERBB3-219ENST00000551242 INAQ16352 499 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 IRAK1BP1Q5VVH5 260 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 SLCO6A1Q86UG4 719 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 CLIP4Q8N3C7 705 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 C7orf31Q8N865 590 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 CAPSLQ8WWF8 208 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 FKBP10Q96AY3 582 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 EFHD2Q96C19 240 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-219ENST00000551242 TRIM15Q9C019 465 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 LRRC4Q9HBW1 653 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 CASS4Q9NQ75 786 aa12.28□□□□□ -0.44
ERBB3-219ENST00000551242 ANK1P16157 1881 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 FXYD1O00168 92 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 STMN1P16949 149 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 CAPN3P20807 821 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 ARCN1P48444 511 aaKnown RBP12.27□□□□□ -0.44
ERBB3-219ENST00000551242 LSM3P62310 102 aaKnown RBP12.27□□□□□ -0.44
ERBB3-219ENST00000551242 FAM83EQ2M2I3 478 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 RABL3Q5HYI8 236 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 PAGE2BQ5JRK9 111 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 LCN8Q6JVE9 175 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 SPARTQ8N0X7 666 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 PARP8Q8N3A8 854 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 PNPLA1Q8N8W4 532 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 PNPT1Q8TCS8 783 aaKnown RBP12.27□□□□□ -0.44
ERBB3-219ENST00000551242 RNF139Q8WU17 664 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 SLC35F5Q8WV83 523 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 C11orf84Q9BUA3 381 aaPredicted RBP12.27□□□□□ -0.44
ERBB3-219ENST00000551242 MINDY3Q9H8M7 445 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 CYP3A43Q9HB55 503 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.27□□□□□ -0.44
ERBB3-219ENST00000551242 ACTR3BQ9P1U1 418 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 ANKMY1Q9P2S6 941 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 USP22Q9UPT9 525 aa12.27□□□□□ -0.44
ERBB3-219ENST00000551242 FAM95CA0A1B0GW59 222 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 TTC24A2A3L6 582 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-219ENST00000551242 ABCB7O75027 752 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 SLC6A2P23975 617 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 LEPRP48357 1165 aaKnown RBP12.27□□□□□ -0.45
ERBB3-219ENST00000551242 TAS2R39P59534 338 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 ADAM17P78536 824 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 IFITM2Q01629 132 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 TRIM32Q13049 653 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 FRG1Q14331 258 aaKnown RBP12.27□□□□□ -0.45
ERBB3-219ENST00000551242 UGT3A2Q3SY77 523 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 HACD2Q6Y1H2 254 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 SLC22A16Q86VW1 577 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 DNERQ8NFT8 737 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 DNAJB14Q8TBM8 379 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 CENPIQ92674 756 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-219ENST00000551242 CDHR1Q96JP9 859 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 PPP1R16BQ96T49 567 aa12.27□□□□□ -0.45
ERBB3-219ENST00000551242 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
ERBB3-219ENST00000551242 COL2A1P02458 1487 aaPredicted RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 UBFD1O14562 309 aaKnown RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 MAFO75444 373 aaPredicted RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 STAG3L1P0CL83 205 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 GPX3P22352 226 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 CES1P23141 567 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ATP5F1P24539 256 aaPredicted RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 CD68P34810 354 aaPredicted RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 CA8P35219 290 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 STX1BP61266 288 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 FPGSQ05932 587 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 TUBA3CQ13748 450 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ARL13BQ3SXY8 428 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 FUT11Q495W5 492 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 PRR23BQ6ZRT6 265 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ROPN1LQ96C74 230 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ELMO2Q96JJ3 720 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ZMAT2Q96NC0 199 aaKnown RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 SLC30A3Q99726 388 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 YTHDF1Q9BYJ9 559 aaKnown RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ZNF229Q9UJW7 825 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 ANKRD31Q8N7Z5 1873 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 INMTO95050 263 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 LDLRP01130 860 aa12.26□□□□□ -0.45
ERBB3-219ENST00000551242 S100BP04271 92 aaPredicted RBP12.26□□□□□ -0.45
ERBB3-219ENST00000551242 HTR1AP08908 422 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms