RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SEPT10Q9P0V9 454 aa15.47■□□□□ 0.07
PRPF40B-211ENST00000551063 COQ6Q9Y2Z9 468 aa15.47■□□□□ 0.07
PRPF40B-211ENST00000551063 KMT2BQ9UMN6 2715 aaPredicted RBP15.47■□□□□ 0.07
PRPF40B-211ENST00000551063 MAP1BP46821 2468 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 A0A0J9YYE9 177 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 FTCDO95954 541 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 TRBC1P01850 177 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 MMP2P08253 660 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 PDHA1P08559 390 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 NME1P15531 152 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 PTPN3P26045 913 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 CD86P42081 329 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 THOP1P52888 689 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 EPHB1P54762 984 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 SIM1P81133 766 aaPredicted RBP15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 SKOR1P84550 965 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 MTM1Q13496 603 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 ARHGEF7Q14155 803 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 FZD2Q14332 565 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 IHHQ14623 411 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 NOMO1Q15155 1222 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 TRIP6Q15654 476 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 KANSL1Q7Z3B3 1105 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 RHBDD1Q8TEB9 315 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 IMP4Q96G21 291 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 HES6Q96HZ4 224 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 TEKT5Q96M29 485 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 CAMK1GQ96NX5 476 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 AGAP3Q96P47 875 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 LYSMD1Q96S90 227 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 HERPUD2Q9BSE4 406 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 HEMGNQ9BXL5 484 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 CEP41Q9BYV8 373 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 PCDH9Q9HC56 1237 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 BTBD3Q9Y2F9 522 aa15.46■□□□□ 0.07
PRPF40B-211ENST00000551063 CAPN8A6NHC0 703 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 NPIPB15A6NHN6 443 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 H3BM21 787 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 DDX3YO15523 660 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 ZNF189O75820 626 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 TJP3O95049 919 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 PRLP01236 227 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 CSF2P04141 144 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 PYGMP11217 842 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 ZNF30P17039 623 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 GM2AP17900 193 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 LHCGRP22888 699 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 HNRNPKP61978 463 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■■□ 23
PRPF40B-211ENST00000551063 WASHC5Q12768 1159 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 ACOX1Q15067 660 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 ESRP1Q6NXG1 681 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 UNQ6494/PRO21346Q6UXR6 183 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 MACC1Q6ZN28 852 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 ZC3H18Q86VM9 953 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 GATAD2AQ86YP4 633 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 RAVER1Q8IY67 606 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 CBARPQ8N350 705 aaPredicted RBP15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 HTR3CQ8WXA8 447 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 TADA1Q96BN2 335 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 DTD2Q96FN9 168 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 COQ10AQ96MF6 247 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 FERMT1Q9BQL6 677 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 GLOD4Q9HC38 313 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 GUCA1BQ9UMX6 200 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 WASF3Q9UPY6 502 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 CHKBQ9Y259 395 aa15.45■□□□□ 0.06
PRPF40B-211ENST00000551063 PCNX2A6NKB5 2137 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 SPAARA0A1B0GVQ0 90 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 PIAS2O75928 621 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 PCCBP05166 539 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 ALPIP09923 528 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 CTPS1P17812 591 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 HNF1BP35680 557 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 OTUD4Q01804 1114 aaKnown RBP15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 BNIP3Q12983 259 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 TPRG1LQ5T0D9 272 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 CDKL3Q8IVW4 592 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 ATL2Q8NHH9 583 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 ACTL9Q8TC94 416 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 NUS1Q96E22 293 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 TBATAQ96M53 351 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 ALS2CR12Q96Q35 445 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 ADGRE3Q9BY15 652 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 DNAJC28Q9NX36 388 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 KLHL8Q9P2G9 620 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 FTSJ1Q9UET6 329 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 PACSIN2Q9UNF0 486 aaPredicted RBP15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 DOCK9Q9BZ29 2069 aa15.44■□□□□ 0.06
PRPF40B-211ENST00000551063 GOLGA6L9A6NEM1 432 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 A8MX80 341 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 H7C0C1 242 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 SDC3O75056 442 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 TRIM16O95361 564 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 HOXC4P09017 264 aaPredicted RBP15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 HTR1BP28222 390 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 TEAD1P28347 426 aa15.43■□□□□ 0.06
PRPF40B-211ENST00000551063 ATP5OP48047 213 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms