RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GJA1P17302 382 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 HDCP19113 662 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 TYMPP19971 482 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 RPL9P32969 192 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 STAT6P42226 847 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CASP4P49662 377 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 LIG4P49917 911 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 NDUFA8P51970 172 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ZXDBP98169 803 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 COLEC12Q5KU26 742 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ATAT1Q5SQI0 421 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 RBM20Q5T481 1227 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 TSTD2Q5T7W7 516 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 RRAGBQ5VZM2 374 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 WSCD1Q658N2 575 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CENPPQ6IPU0 288 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC149Q6ZUS6 474 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 UNC13DQ70J99 1090 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 GET4Q7L5D6 327 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 C12orf56Q8IXR9 622 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ZC3H3Q8IXZ2 948 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 TDRD5Q8NAT2 981 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ATAD1Q8NBU5 361 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 FAM46DQ8NEK8 389 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ZNF461Q8TAF7 563 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 SPATA20Q8TB22 786 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 TMEM174Q8WUU8 243 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ING5Q8WYH8 240 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PPP2R3CQ969Q6 453 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 SLC35A4Q96G79 324 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PAGE5Q96GU1 130 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 SENP8Q96LD8 212 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC94Q9BW85 323 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ACTRT3Q9BYD9 372 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 MTMR12Q9C0I1 747 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 ZCWPW1Q9H0M4 648 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PLEKHA4Q9H4M7 779 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PLEKHA5Q9HAU0 1116 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CPNE5Q9HCH3 593 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PDE11AQ9HCR9 933 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 PANK4Q9NVE7 773 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 C2orf42Q9NWW7 574 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 HMGXB4Q9UGU5 601 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 AGO2Q9UKV8 859 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 UBQLN1Q9UMX0 589 aaKnown RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 DERAQ9Y315 318 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 MTF2Q9Y483 593 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-214ENST00000550893 RAD54BQ9Y620 910 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CKAP5Q14008 2032 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 NUP205Q92621 2012 aa5.18□□□□□ -1.58
SCAF11-214ENST00000550893 CEP192Q8TEP8 1941 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 EIF3DO15371 548 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 EXTL3O43909 919 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 ATP2C2O75185 946 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 TBCAO75347 108 aaKnown RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 GCNT3O95395 438 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 HNRNPA1P09651 372 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 ALADP13716 330 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 GAP43P17677 238 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 ITGALP20701 1170 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 PGFP49763 221 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 POU5F1Q01860 360 aaKnown RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CYP24A1Q07973 514 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 GPR17Q13304 367 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 ZNF267Q14586 743 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 TMEM132DQ14C87 1099 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 STK38Q15208 465 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 SOWAHAQ2M3V2 549 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 ADALQ6DHV7 355 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 TANGO2Q6ICL3 276 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 VITQ6UXI7 678 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CYP26C1Q6V0L0 522 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC73Q6ZRK6 1079 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 PAQR9Q6ZVX9 377 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CEP57Q86XR8 500 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CCDC105Q8IYK2 499 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 HACE1Q8IYU2 909 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 PDCL2Q8N4E4 241 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CELF5Q8N6W0 485 aaKnown RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 BRIX1Q8TDN6 353 aaKnown RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CDK5RAP3Q96JB5 506 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 RIPOR3Q96MK2 946 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 PGLYRP2Q96PD5 576 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 SLC22A12Q96S37 553 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 CGRRF1Q99675 332 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 KXD1Q9BQD3 176 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 FAM213AQ9BRX8 229 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 ASB7Q9H672 318 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 MRPL44Q9H9J2 332 aaKnown RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 SLC38A7Q9NVC3 462 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 STK39Q9UEW8 545 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 AFF4Q9UHB7 1163 aaKnown RBP5.17□□□□□ -1.58
SCAF11-214ENST00000550893 UBE4BO95155 1302 aa5.17□□□□□ -1.58
SCAF11-214ENST00000550893 SPTBN2O15020 2390 aa5.16□□□□□ -1.58
SCAF11-214ENST00000550893 FREM2Q5SZK8 3169 aa5.16□□□□□ -1.58
SCAF11-214ENST00000550893 LRRIQ3A6PVS8 624 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-214ENST00000550893 CLIC2O15247 247 aa5.16□□□□□ -1.58
SCAF11-214ENST00000550893 AP1G1O43747 822 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms