RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 DPPA4Q7L190 304 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 PSTKQ8IV42 348 aaKnown RBP23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 ZSCAN1Q8NBB4 408 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 PLA2G15Q8NCC3 412 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 ECHDC3Q96DC8 303 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 ZWILCHQ9H900 591 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 CYP4F12Q9HCS2 524 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 MYO6Q9UM54 1294 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 LOXL2Q9Y4K0 774 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 MGAQ8IWI9 3026 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 TMEM202A6NGA9 273 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 NUDT21O43809 227 aaKnown RBP23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 LIPCP11150 499 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 ERCC2P18074 760 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 STX1AQ16623 288 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 PPP6R3Q5H9R7 873 aaPredicted RBP23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 AFMIDQ63HM1 303 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 PNCKQ6P2M8 343 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 OR1E3Q8WZA6 343 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 LMBRD1Q9NUN5 540 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 ZNF462Q96JM2 2506 aa23.15■■□□□ 1.3
SMARCD1-209ENST00000550477 TMCO5BA8MYB1 307 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 B4DGG1 531 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 CASC3O15234 703 aaKnown RBP23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 TEX33O43247 280 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 HSPA9P38646 679 aaKnown RBP23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 HCAR3P49019 387 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 OGDHQ02218 1023 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 ZNF235Q14590 738 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 PLEKHA7Q6IQ23 1121 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 PIM3Q86V86 326 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 ZSWIM9Q86XI8 627 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 NSMCE1Q8WV22 266 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 SGF29Q96ES7 293 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 ZNF599Q96NL3 588 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 PSKH2Q96QS6 385 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 SNRNP25Q9BV90 132 aaKnown RBP23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 GSDMCQ9BYG8 508 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 TMEM168Q9H0V1 697 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 FGF22Q9HCT0 170 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 MRPL40Q9NQ50 206 aaKnown RBP23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 PHPT1Q9NRX4 125 aaPredicted RBP23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 HEMK1Q9Y5R4 338 aaPredicted RBP23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 ANKRD36A6QL64 1941 aa23.14■■□□□ 1.29
SMARCD1-209ENST00000550477 RGRP47804 291 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 ZFP36L1Q07352 338 aaKnown RBP23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 ILF3Q12906 894 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 RALGDSQ12967 914 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 LBRQ14739 615 aaKnown RBP23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 MANEAQ5SRI9 462 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 SPECC1LQ69YQ0 1117 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 CLEC17AQ6ZS10 378 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 RBM43Q6ZSC3 357 aaKnown RBP23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 SPRED1Q7Z699 444 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 FNIP1Q8TF40 1166 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 FAM117AQ9C073 453 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 SEMA4CQ9C0C4 833 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 AHCTF1Q8WYP5 2266 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 LRP4O75096 1905 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 KALRNO60229 2985 aa23.13■■□□□ 1.29
SMARCD1-209ENST00000550477 PRSS38A1L453 326 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 RHPN2P1A8MT19 583 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 A8MX80 341 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 NOBOXO60393 691 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 CYP2A6P11509 494 aaPredicted RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 SFTPCP11686 197 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 MYCLP1P12525 358 aaPredicted RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 KRT10P13645 584 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 HGFP14210 728 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 CD82P27701 267 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 ARL4AP40617 200 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 HLTFQ14527 1009 aaKnown RBP eCLIP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 CLPPQ16740 277 aaPredicted RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 MAP9Q49MG5 647 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 PHF19Q5T6S3 580 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 IRF2BP2Q7Z5L9 587 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 PDCD6IPQ8WUM4 868 aaKnown RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 NUS1Q96E22 293 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 KCTD15Q96SI1 283 aaPredicted RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 CARS2Q9HA77 564 aaKnown RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 MRPL47Q9HD33 250 aaKnown RBP23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 SCINQ9Y6U3 715 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 RNF215Q9Y6U7 377 aa23.12■■□□□ 1.29
SMARCD1-209ENST00000550477 TMEM191CA6NGB0 347 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 GOLGA6L22H0YM25 854 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 TRAFD1O14545 582 aaPredicted RBP23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 SLC28A2O43868 658 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 SOCS5O75159 536 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 CPNE6O95741 557 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 ITGB2P05107 769 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 ATP1A3P13637 1013 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 MIPP30301 263 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 MAPK10P53779 464 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 CA9Q16790 459 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 ARHGAP12Q8IWW6 846 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 NDUFAF2Q8N183 169 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 TRIM11Q96F44 468 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 GBP4Q96PP9 640 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 B3GNT4Q9C0J1 378 aa23.11■■□□□ 1.29
SMARCD1-209ENST00000550477 NAT10Q9H0A0 1025 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms