RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 FMR1NBQ8N0W7 255 aaPredicted RBP10.57□□□□□ -0.72
VPS29-208ENST00000550267 IL22RA1Q8N6P7 574 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 NETO2Q8NC67 525 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 RCBTB1Q8NDN9 531 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 SPATA20Q8TB22 786 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 OR1E3Q8WZA6 343 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 ABHD17AQ96GS6 310 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
VPS29-208ENST00000550267 WDR92Q96MX6 357 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 HAPLN3Q96S86 360 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 B3GNT4Q9C0J1 378 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 GDPD2Q9HCC8 539 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 TUBD1Q9UJT1 453 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 PLAAQ9Y263 795 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
VPS29-208ENST00000550267 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS29-208ENST00000550267 ZFC3H1O60293 1989 aaKnown RBP10.57□□□□□ -0.72
VPS29-208ENST00000550267 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 B4GAT1O43505 415 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 SMC2O95347 1197 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 FGF3P11487 239 aaPredicted RBP10.56□□□□□ -0.72
VPS29-208ENST00000550267 AMPD1P23109 780 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 FLT3P36888 993 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 SNX16P57768 344 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 CTBSQ01459 385 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 AMZ1Q400G9 498 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 ACBD5Q5T8D3 534 aaPredicted RBP10.56□□□□□ -0.72
VPS29-208ENST00000550267 FAM102AQ5T9C2 384 aaPredicted RBP10.56□□□□□ -0.72
VPS29-208ENST00000550267 FOXR2Q6PJQ5 311 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 PIM3Q86V86 326 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 FAM131BQ86XD5 332 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 IRF2BP1Q8IU81 584 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 ZDHHC17Q8IUH5 632 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 CCL4L1Q8NHW4 92 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 C9orf43Q8TAL5 461 aaPredicted RBP10.56□□□□□ -0.72
VPS29-208ENST00000550267 NUDT22Q9BRQ3 303 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 CRACR2AQ9BSW2 395 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 DPEP2Q9H4A9 486 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 SUV39H2Q9H5I1 410 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 LRRC4CQ9HCJ2 640 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 MRPL40Q9NQ50 206 aaKnown RBP10.56□□□□□ -0.72
VPS29-208ENST00000550267 AKAP7Q9P0M2 348 aaPredicted RBP10.56□□□□□ -0.72
VPS29-208ENST00000550267 DAAM1Q9Y4D1 1078 aa10.56□□□□□ -0.72
VPS29-208ENST00000550267 LRP4O75096 1905 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 CXorf51AA0A1B0GTR3 108 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 TMEM202A6NGA9 273 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 GNB5O14775 395 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 INSIG1O15503 277 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 NUDT21O43809 227 aaKnown RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 TMCC1O94876 653 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 CPNE6O95741 557 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 IGSF6O95976 241 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 FURINP09958 794 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 SLC9A1P19634 815 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 XPAP23025 273 aaPredicted RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 UGT1A3P35503 534 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 KRT9P35527 623 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 ETFBP38117 255 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 MAZP56270 477 aaKnown RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 STX17P56962 302 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 GEMIN4P57678 1058 aaKnown RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 OR1D5P58170 312 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 SPECC1LQ69YQ0 1117 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 RWDD4Q6NW29 188 aaKnown RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 TRIM65Q6PJ69 517 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 CACNA2D3Q8IZS8 1091 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 PLA2G15Q8NCC3 412 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 OR56A4Q8NGH8 313 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 NELFBQ8WX92 580 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 SHC3Q92529 594 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 BTBD6Q96KE9 485 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 CCDC74BQ96LY2 380 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 CFAP57Q96MR6 1250 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 GDAP1L1Q96MZ0 367 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 TAAR9Q96RI9 348 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 TTYH3Q9C0H2 523 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 SCAND2PQ9GZW5 306 aaPredicted RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 TMEM168Q9H0V1 697 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 CDH19Q9H159 772 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 FGF22Q9HCT0 170 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 PPARGC1AQ9UBK2 798 aaKnown RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 DKK3Q9UBP4 350 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 AJAP1Q9UKB5 411 aaPredicted RBP10.55□□□□□ -0.72
VPS29-208ENST00000550267 HPCAL4Q9UM19 191 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 B3GALT1Q9Y5Z6 326 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 DGKBQ9Y6T7 804 aa10.55□□□□□ -0.72
VPS29-208ENST00000550267 FLNCQ14315 2725 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 IGHV5-10-1A0A0J9YXX1 117 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 ZNF891A8MT65 544 aaPredicted RBP10.54□□□□□ -0.72
VPS29-208ENST00000550267 GOLGA8SH3BPF8 625 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 NKX2-8O15522 239 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 DUX1O43812 170 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 RAD1O60671 282 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 PIGNO95427 931 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
VPS29-208ENST00000550267 ARAFP10398 606 aa10.54□□□□□ -0.72
VPS29-208ENST00000550267 EPXP11678 715 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms